RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 FBXO16Q8IX29 292 aaPredicted RBP9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 EDAQ92838 391 aa9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 POP1Q99575 1024 aaKnown RBP9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 RAD9AQ99638 391 aa9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 C17orf80Q9BSJ5 609 aa9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 KANSL2Q9H9L4 492 aa9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 SLC38A10Q9HBR0 1119 aa9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 NOB1Q9ULX3 412 aaKnown RBP9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 DDX49Q9Y6V7 483 aaKnown RBP9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 FAM186AA6NE01 2351 aa9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 COL4A6Q14031 1691 aa9.16□□□□□ -0.94
NPIPB4-215ENST00000542133 TMEM221A6NGB7 291 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 ASB14A6NK59 587 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 M0R296 226 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 ZBED4O75132 1171 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 CDK8P49336 464 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 KCNA1Q09470 495 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 BFSP2Q13515 415 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 GPNMBQ14956 572 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 SMAD2Q15796 467 aaKnown RBP9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 LRRFIP1Q32MZ4 808 aaKnown RBP9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 TCEAL5Q5H9L2 206 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 FAM47CQ5HY64 1035 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 TRIM67Q6ZTA4 783 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 LCORLQ8N3X6 602 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 BANK1Q8NDB2 785 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 PPP1R13LQ8WUF5 828 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 SREK1Q8WXA9 508 aaKnown RBP9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 PBXIP1Q96AQ6 731 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 A1CFQ9NQ94 594 aaKnown RBP9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 HOMER2Q9NSB8 354 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 POLR3EQ9NVU0 708 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 PCDHGA4Q9Y5G9 962 aa9.15□□□□□ -0.94
NPIPB4-215ENST00000542133 KMT2BQ9UMN6 2715 aaPredicted RBP9.15□□□□□ -0.95
NPIPB4-215ENST00000542133 CYP2D7A0A087X1C5 515 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 NDUFB10O96000 172 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 MYL3P08590 195 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 PDE6AP16499 860 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 LIG1P18858 919 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 OAZ1P54368 228 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 PTPROQ16827 1216 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 TCTN1Q2MV58 587 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 IQSEC1Q6DN90 963 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 NFRKBQ6P4R8 1299 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 CNKSR3Q6P9H4 555 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 EP400NLQ6ZTU2 488 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 C16orf86Q6ZW13 317 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 EEPD1Q7L9B9 569 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 FBXL6Q8N531 539 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 AFAP1L1Q8TED9 768 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 KIFC2Q96AC6 838 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 MTG1Q9BT17 334 aaPredicted RBP9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 ACAD9Q9H845 621 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 CLDND1Q9NY35 253 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 CTNNA3Q9UI47 895 aa9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 CTDP1Q9Y5B0 961 aaPredicted RBP9.14□□□□□ -0.95
NPIPB4-215ENST00000542133 ZFHX4Q86UP3 3567 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 PROB1E7EW31 1015 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 F5H6K3 240 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 MBTPS2O43462 519 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 ZMYND10O75800 440 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 CXCL10P02778 98 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 GNAI2P04899 355 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 LTBRP36941 435 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 CPT1AP50416 773 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 VCPP55072 806 aaKnown RBP9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 PTPN11Q06124 597 aaPredicted RBP9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 KLRC3Q07444 240 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 SETDB1Q15047 1291 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 CCDC96Q2M329 555 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 DUSP28Q4G0W2 176 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 CCDC181Q5TID7 509 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 C12orf60Q5U649 245 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 FAM117BQ6P1L5 589 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 ASCL5Q7RTU5 278 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 RPAINQ86UA6 219 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 CAGE1Q8TC20 777 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 ATOH1Q92858 354 aaPredicted RBP9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 CLUAP1Q96AJ1 413 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 CRBNQ96SW2 442 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 CCDC8Q9H0W5 538 aaPredicted RBP9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 NSUN3Q9H649 340 aaKnown RBP9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 VTA1Q9NP79 307 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 RNF146Q9NTX7 359 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 COG6Q9Y2V7 657 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 TRIP12Q14669 1992 aaPredicted RBP9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 NLRC5Q86WI3 1866 aa9.13□□□□□ -0.95
NPIPB4-215ENST00000542133 NCOR2Q9Y618 2525 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 ZNF532Q9HCE3 1301 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 DNAH14Q0VDD8 3507 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 MYH4Q9Y623 1939 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 ABHD14A-ACY1A0A1B0GW23 586 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 TCRBV5S4A2TA0A5A2 114 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms