RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 IBSPP21815 317 aaPredicted RBP10.16□□□□□ -0.78
THBS3-211ENST00000541990 PSEN1P49768 467 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 SNAP25P60880 206 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 TUBB4BP68371 445 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 RRP1BQ14684 758 aaKnown RBP10.16□□□□□ -0.78
THBS3-211ENST00000541990 MAP9Q49MG5 647 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 TBC1D10BQ4KMP7 808 aaPredicted RBP10.16□□□□□ -0.78
THBS3-211ENST00000541990 STRIP1Q5VSL9 837 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 KRT26Q7Z3Y9 468 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 FANCBQ8NB91 859 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 GPKOWQ92917 476 aaPredicted RBP eCLIP10.16□□□□□ -0.78
THBS3-211ENST00000541990 CEP95Q96GE4 821 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 UIMC1Q96RL1 719 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 TMEM39BQ9GZU3 492 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 RNF41Q9H4P4 317 aaPredicted RBP10.16□□□□□ -0.78
THBS3-211ENST00000541990 ARPP21Q9UBL0 812 aaPredicted RBP10.16□□□□□ -0.78
THBS3-211ENST00000541990 LRRC10BA6NIK2 292 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 INPP5BP32019 993 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 CXCR5P32302 372 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 LIFRP42702 1097 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 MMP14P50281 582 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 GSCP56915 257 aaPredicted RBP10.16□□□□□ -0.78
THBS3-211ENST00000541990 PPP4CP60510 307 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 APBA1Q02410 837 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 PPFIA1Q13136 1202 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 PAK1Q13153 545 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 KIAA1328Q86T90 577 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 TRIM22Q8IYM9 498 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 GSDMAQ96QA5 445 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 TAOK3Q9H2K8 898 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 CNNM2Q9H8M5 875 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 JADE2Q9NQC1 790 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 DOCK2Q92608 1830 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 GAKO14976 1311 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 TARSL2A2RTX5 802 aaKnown RBP10.15□□□□□ -0.78
THBS3-211ENST00000541990 RASSF10A6NK89 507 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 TUBBP07437 444 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 PLEKP08567 350 aaPredicted RBP10.15□□□□□ -0.78
THBS3-211ENST00000541990 IDEP14735 1019 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 PRCPP42785 496 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 IL17AQ16552 155 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 SLC35G1Q2M3R5 365 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 SRBD1Q8N5C6 995 aaKnown RBP10.15□□□□□ -0.78
THBS3-211ENST00000541990 HAUS4Q9H6D7 363 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 CD248Q9HCU0 757 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 CAPN6Q9Y6Q1 641 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 ZNF263O14978 683 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 DEXIO95424 95 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 PARP1P09874 1014 aaKnown RBP10.15□□□□□ -0.78
THBS3-211ENST00000541990 DGKZQ13574 1117 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 PRKG1Q13976 671 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 ZYXQ15942 572 aaKnown RBP10.15□□□□□ -0.78
THBS3-211ENST00000541990 PKN1Q16512 942 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 NIM1KQ8IY84 436 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 OR8K1Q8NGG5 319 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 CEP89Q96ST8 783 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 SH3GL2Q99962 352 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 MLXIPQ9HAP2 919 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 ANAPC4Q9UJX5 808 aa10.15□□□□□ -0.78
THBS3-211ENST00000541990 ZSCAN5CA6NGD5 496 aaPredicted RBP10.14□□□□□ -0.79
THBS3-211ENST00000541990 B4DLN1 442 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 KRT14P02533 472 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 SLC16A2P36021 539 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 FNTAP49354 379 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 TROAPQ12815 778 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 PDXDC2PQ6P474 469 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 MB21D1Q8N884 522 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 RASGRP4Q8TDF6 673 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 TMEM47Q9BQJ4 181 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 RWDD2AQ9UIY3 292 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 NRXN2Q9P2S2 1712 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 PDS5AQ29RF7 1337 aaKnown RBP10.14□□□□□ -0.79
THBS3-211ENST00000541990 CCDC91Q7Z6B0 441 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 CREG2Q8IUH2 290 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 SPICE1Q8N0Z3 855 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 CNPY4Q8N129 248 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 PNMA1Q8ND90 353 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 WASF1Q92558 559 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 DNAJC7Q99615 494 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 JPH2Q9BR39 696 aaPredicted RBP10.14□□□□□ -0.79
THBS3-211ENST00000541990 FAM184BQ9ULE4 1060 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 LUC7L2Q9Y383 392 aaKnown RBP10.14□□□□□ -0.79
THBS3-211ENST00000541990 RGPD3A6NKT7 1758 aaPredicted RBP10.14□□□□□ -0.79
THBS3-211ENST00000541990 RGPD4Q7Z3J3 1758 aa10.14□□□□□ -0.79
THBS3-211ENST00000541990 NCK2O43639 380 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 ZEB2O60315 1214 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 PTGDRQ13258 359 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 NFRKBQ6P4R8 1299 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 RSBN1LQ6PCB5 846 aaPredicted RBP10.13□□□□□ -0.79
THBS3-211ENST00000541990 RTKN2Q8IZC4 609 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 ANKRD20A12PQ8NF67 263 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 GPCPD1Q9NPB8 672 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 LRWD1Q9UFC0 647 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 CEP131Q9UPN4 1083 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 ESYT3A0FGR9 886 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 USP17L5A8MUK1 530 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 NDUFAB1O14561 156 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 MAP2K2P36507 400 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms