RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PPP2R5BQ15173 497 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 CDC37Q16543 378 aaPredicted RBP8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 JAKMIP3Q5VZ66 844 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 TRMT44Q8IYL2 757 aaKnown RBP8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 KLRG1Q96E93 195 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 CLIC6Q96NY7 704 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 TANGO6Q9C0B7 1094 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 GOLPH3LQ9H4A5 285 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 ELP3Q9H9T3 547 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 BARHL2Q9NY43 387 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 SMCO2A6NFE2 343 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L15C9J2P7 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L13C9JLJ4 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L11C9JVI0 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L18D6R9N7 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L22D6RA61 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L17D6RBQ6 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L19D6RCP7 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L20D6RJB6 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 NR3C2P08235 984 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 SNRPBP14678 240 aaKnown RBP8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 TIMP2P16035 220 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 ME1P48163 572 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 GNAQP50148 359 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 WDR4P57081 412 aaKnown RBP8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L24Q0WX57 530 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 SAFBQ15424 915 aaKnown RBP eCLIP8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 ZNF174Q15697 407 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 CAMK4Q16566 473 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 INF2Q27J81 1249 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L6PQ6QN14 398 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 SCYL3Q8IZE3 742 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 GMCL1P1Q8NEA9 526 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 ERCC4Q92889 916 aaPredicted RBP8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 TNFRSF25Q93038 417 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 TRIM47Q96LD4 638 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 MAP3K14Q99558 947 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 ARHGAP9Q9BRR9 750 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 VCPKMTQ9H867 229 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 PRR12Q9ULL5 1215 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 CEP350Q5VT06 3117 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 A0A087WWV3 80 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 CTNND1O60716 968 aaKnown RBP8.83□□□□□ -1
AC005840.3-201ENST00000541888 BMP1P13497 986 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 STAT2P52630 851 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 STK38Q15208 465 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 GPATCH4Q5T3I0 446 aaKnown RBP8.83□□□□□ -1
AC005840.3-201ENST00000541888 SYDE2Q5VT97 1194 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 ANO1Q5XXA6 986 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 DCAF15Q66K64 600 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 TRIM46Q7Z4K8 759 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 BLIDQ8IZY5 108 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.83□□□□□ -1
AC005840.3-201ENST00000541888 BICD2Q8TD16 824 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 DCAF4Q8WV16 495 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 TBC1D5Q92609 795 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 GJA10Q969M2 543 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 P2RX7Q99572 595 aaKnown RBP8.83□□□□□ -1
AC005840.3-201ENST00000541888 OCSTAMPQ9BR26 566 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 GRPEL1Q9HAV7 217 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 HOMER2Q9NSB8 354 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 PCDHA7Q9UN72 937 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 PCDHA6Q9UN73 950 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 PCDHA8Q9Y5H6 950 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 SNCAIPQ9Y6H5 919 aa8.83□□□□□ -1
AC005840.3-201ENST00000541888 ZC3H4Q9UPT8 1303 aaKnown RBP8.83□□□□□ -1
AC005840.3-201ENST00000541888 RLFQ13129 1914 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 A0A1B0GVL5 298 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 ZBTB5O15062 677 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 XBP1P17861 261 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 VCAM1P19320 739 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 HOXA13P31271 388 aaPredicted RBP8.82□□□□□ -1
AC005840.3-201ENST00000541888 MCM7P33993 719 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 USP50Q70EL3 339 aaPredicted RBP8.82□□□□□ -1
AC005840.3-201ENST00000541888 VASH1Q7L8A9 365 aaPredicted RBP8.82□□□□□ -1
AC005840.3-201ENST00000541888 BRAPQ7Z569 592 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 CPXCR1Q8N123 301 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 LINC00301Q8NCQ3 95 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 TRIM44Q96DX7 344 aaPredicted RBP8.82□□□□□ -1
AC005840.3-201ENST00000541888 GMCL1Q96IK5 515 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 RPAP3Q9H6T3 665 aaPredicted RBP8.82□□□□□ -1
AC005840.3-201ENST00000541888 PICK1Q9NRD5 415 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 PCDHA4Q9UN74 947 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 MAP4K5Q9Y4K4 846 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 PCDHA1Q9Y5I3 950 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 DNAH12Q6ZR08 3092 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 PNMA6FA0A0J9YX94 578 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 SYCE3A1L190 88 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 UBXN2AP68543 259 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 PTPAQ15257 358 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 KLHL40Q2TBA0 621 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 TREML2Q5T2D2 321 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 USP49Q70CQ1 688 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 TMEM87AQ8NBN3 555 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 AGBL1Q96MI9 1066 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 ZNF396Q96N95 335 aaPredicted RBP8.82□□□□□ -1
AC005840.3-201ENST00000541888 PANK2Q9BZ23 570 aa8.82□□□□□ -1
AC005840.3-201ENST00000541888 SCAND2PQ9GZW5 306 aaPredicted RBP8.82□□□□□ -1
AC005840.3-201ENST00000541888 FOXP1Q9H334 677 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms