RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 LY9Q9HBG7 655 aa16.29■□□□□ 0.2
SUDS3-203ENST00000541591 B4DLN1 442 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 PRC1O43663 620 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 PLEKHA8P1O95397 391 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 GH1P01241 217 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 NR3C2P08235 984 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 HSD17B4P51659 736 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 MRPL12P52815 198 aaKnown RBP16.28■□□□□ 0.2
SUDS3-203ENST00000541591 RABGGTBP53611 331 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 TROAPQ12815 778 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 GRIN2CQ14957 1233 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
SUDS3-203ENST00000541591 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 VWCEQ96DN2 955 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 PBX4Q9BYU1 374 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 ANO2Q9NQ90 1003 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 MRVI1Q9Y6F6 885 aa16.28■□□□□ 0.2
SUDS3-203ENST00000541591 TCF20Q9UGU0 1960 aaKnown RBP16.27■□□□□ 0.2
SUDS3-203ENST00000541591 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.27■□□□□ 0.2
SUDS3-203ENST00000541591 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.27■□□□□ 0.2
SUDS3-203ENST00000541591 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 A6NJR5 290 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 ZBBXA8MT70 800 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 SLC27A2O14975 620 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.2
SUDS3-203ENST00000541591 FOSL2P15408 326 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 SART3Q15020 963 aaKnown RBP16.27■□□□□ 0.2
SUDS3-203ENST00000541591 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
SUDS3-203ENST00000541591 CATIPQ7Z7H3 387 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 TIFAQ96CG3 184 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 ALG1Q9BT22 464 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 RIOX1Q9H6W3 641 aa16.27■□□□□ 0.2
SUDS3-203ENST00000541591 DDX41Q9UJV9 622 aaKnown RBP16.27■□□□□ 0.2
SUDS3-203ENST00000541591 REV3LO60673 3130 aa16.27■□□□□ 0.19
SUDS3-203ENST00000541591 DLL1O00548 723 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 RGS20O76081 388 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 FGBP02675 491 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 MYOGP15173 224 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 PGM5Q15124 567 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 RASIP1Q5U651 963 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 CREB3L3Q68CJ9 461 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 NFXL1Q6ZNB6 911 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 MAFAQ8NHW3 353 aaPredicted RBP16.26■□□□□ 0.19
SUDS3-203ENST00000541591 KAT2BQ92831 832 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 PDCD2LQ9BRP1 358 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 NKX2-4Q9H2Z4 354 aa16.26■□□□□ 0.19
SUDS3-203ENST00000541591 SH2B2O14492 632 aaPredicted RBP16.25■□□□□ 0.19
SUDS3-203ENST00000541591 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
SUDS3-203ENST00000541591 HERVK_113Q902F9 699 aa16.25■□□□□ 0.19
SUDS3-203ENST00000541591 IWS1Q96ST2 819 aa16.25■□□□□ 0.19
SUDS3-203ENST00000541591 ZNF576Q9H609 170 aa16.25■□□□□ 0.19
SUDS3-203ENST00000541591 YBX2Q9Y2T7 364 aaKnown RBP16.25■□□□□ 0.19
SUDS3-203ENST00000541591 TELO2Q9Y4R8 837 aa16.25■□□□□ 0.19
SUDS3-203ENST00000541591 CHD7Q9P2D1 2997 aa16.25■□□□□ 0.19
SUDS3-203ENST00000541591 PNMA6FA0A0J9YX94 578 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
SUDS3-203ENST00000541591 EIF3JO75822 258 aaKnown RBP16.24■□□□□ 0.19
SUDS3-203ENST00000541591 GGPS1O95749 300 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 SP2Q02086 613 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 PTGISQ16647 500 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 CCDC82Q8N4S0 544 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 USP38Q8NB14 1042 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 CTCFLQ8NI51 663 aaPredicted RBP16.24■□□□□ 0.19
SUDS3-203ENST00000541591 PPM1EQ8WY54 764 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 PRDM12Q9H4Q4 367 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 RTEL1Q9NZ71 1219 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 NOD1Q9Y239 953 aa16.24■□□□□ 0.19
SUDS3-203ENST00000541591 CCDC69A6NI79 296 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 UBA1P22314 1058 aaKnown RBP16.23■□□□□ 0.19
SUDS3-203ENST00000541591 CCND2P30279 289 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 PSEN2P49810 448 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 ZNF200P98182 395 aaPredicted RBP16.23■□□□□ 0.19
SUDS3-203ENST00000541591 NFRKBQ6P4R8 1299 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 USP17L6PQ6QN14 398 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.23■□□□□ 0.19
SUDS3-203ENST00000541591 DHX37Q8IY37 1157 aaKnown RBP16.23■□□□□ 0.19
SUDS3-203ENST00000541591 SRBD1Q8N5C6 995 aaKnown RBP16.23■□□□□ 0.19
SUDS3-203ENST00000541591 CTAGE1Q96RT6 745 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 HDAC6Q9UBN7 1215 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 A0A0C4DFX4 3053 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 ATG2AQ2TAZ0 1938 aa16.23■□□□□ 0.19
SUDS3-203ENST00000541591 MYH9P35579 1960 aaKnown RBP16.22■□□□□ 0.19
SUDS3-203ENST00000541591 KPNA6O60684 536 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 DDAH1O94760 285 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 MCM5P33992 734 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 GHRHRQ02643 423 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 HIC1Q14526 733 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 MFSD10Q14728 455 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 HSDL1Q3SXM5 330 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 DHX38Q92620 1227 aaKnown RBP16.22■□□□□ 0.19
SUDS3-203ENST00000541591 WNT8BQ93098 351 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 PRDM6Q9NQX0 595 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 EVPLQ92817 2033 aa16.22■□□□□ 0.19
SUDS3-203ENST00000541591 IQCF3P0C7M6 154 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms