RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SAFBQ15424 915 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDB1-218ENST00000540784 KRT40Q6A162 431 aa17.71■□□□□ 0.43
DDB1-218ENST00000540784 RASGRP4Q8TDF6 673 aa17.71■□□□□ 0.43
DDB1-218ENST00000540784 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
DDB1-218ENST00000540784 WDR11Q9BZH6 1224 aa17.71■□□□□ 0.43
DDB1-218ENST00000540784 BRMS1Q9HCU9 246 aa17.71■□□□□ 0.43
DDB1-218ENST00000540784 RTEL1Q9NZ71 1219 aa17.71■□□□□ 0.43
DDB1-218ENST00000540784 RARBP10826 455 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 CAPN2P17655 700 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 KRT2P35908 639 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 ZNF76P36508 570 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 ADCYAP1R1P41586 468 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 MRPS9P82933 396 aaKnown RBP17.7■□□□□ 0.42
DDB1-218ENST00000540784 GUCY1B3Q02153 619 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 NPY5RQ15761 445 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 ANO1Q5XXA6 986 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 LHX8Q68G74 356 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 SCFD2Q8WU76 684 aa17.7■□□□□ 0.42
DDB1-218ENST00000540784 INTS4Q96HW7 963 aaKnown RBP17.7■□□□□ 0.42
DDB1-218ENST00000540784 M0R2N6 131 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 MMP1P03956 469 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 SREBF1P36956 1147 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 GJA8P48165 433 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 TTLL4Q14679 1199 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 GNPTABQ3T906 1256 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 KCNV1Q6PIU1 500 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 NLRX1Q86UT6 975 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 FBXO18Q8NFZ0 1043 aa17.69■□□□□ 0.42
DDB1-218ENST00000540784 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
DDB1-218ENST00000540784 CCDC194A0A1B0GVG4 234 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.68■□□□□ 0.42
DDB1-218ENST00000540784 DUSP11O75319 330 aaKnown RBP17.68■□□□□ 0.42
DDB1-218ENST00000540784 TXNP10599 105 aaKnown RBP17.68■□□□□ 0.42
DDB1-218ENST00000540784 SMPD1P17405 629 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 ARHGAP4P98171 946 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 OXER1Q8TDS5 423 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 CRISPLD2Q9H0B8 497 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 AP5M1Q9H0R1 490 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 MRVI1Q9Y6F6 885 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 HTTP42858 3142 aa17.68■□□□□ 0.42
DDB1-218ENST00000540784 POTEFA5A3E0 1075 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 DYNC1LI2O43237 492 aaPredicted RBP17.67■□□□□ 0.42
DDB1-218ENST00000540784 RGS20O76081 388 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 HSP90AA1P07900 732 aaKnown RBP17.67■□□□□ 0.42
DDB1-218ENST00000540784 CYP3A4P08684 503 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 TGFB3P10600 412 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 EN2P19622 333 aaPredicted RBP17.67■□□□□ 0.42
DDB1-218ENST00000540784 USP11P51784 963 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 NONOQ15233 471 aaKnown RBP eCLIP17.67■□□□□ 0.42
DDB1-218ENST00000540784 DUSP28Q4G0W2 176 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 LARP1BQ659C4 914 aaKnown RBP17.67■□□□□ 0.42
DDB1-218ENST00000540784 DIS3L2Q8IYB7 885 aaKnown RBP17.67■□□□□ 0.42
DDB1-218ENST00000540784 ARRDC4Q8NCT1 418 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 INPP4AQ96PE3 977 aaPredicted RBP17.67■□□□□ 0.42
DDB1-218ENST00000540784 MXRA8Q9BRK3 442 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 SPC25Q9HBM1 224 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 XPNPEP3Q9NQH7 507 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 OGDHLQ9ULD0 1010 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 Q9Y3F1 56 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 UBIAD1Q9Y5Z9 338 aa17.67■□□□□ 0.42
DDB1-218ENST00000540784 LCTP09848 1927 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 RBBP6Q7Z6E9 1792 aaKnown RBP17.66■□□□□ 0.42
DDB1-218ENST00000540784 SPATA31C2B4DYI2 1134 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 H3BQV1 296 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 NKRFO15226 690 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDB1-218ENST00000540784 MAFGO15525 162 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
DDB1-218ENST00000540784 ICAM3P32942 547 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 SOX10P56693 466 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 LY6KQ17RY6 165 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 TMEM63BQ5T3F8 832 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 IFFO2Q5TF58 517 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 CCDC62Q6P9F0 684 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 TBCKQ8TEA7 893 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 CDHR1Q96JP9 859 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 JADE2Q9NQC1 790 aa17.66■□□□□ 0.42
DDB1-218ENST00000540784 DDX41Q9UJV9 622 aaKnown RBP17.66■□□□□ 0.42
DDB1-218ENST00000540784 GNEQ9Y223 722 aaKnown RBP17.66■□□□□ 0.42
DDB1-218ENST00000540784 ADCY6O43306 1168 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 FIBPO43427 364 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 PGK1P00558 417 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 ITGB5P18084 799 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 NR5A1Q13285 461 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 GNL2Q13823 731 aaKnown RBP17.65■□□□□ 0.42
DDB1-218ENST00000540784 CEP55Q53EZ4 464 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 PIK3AP1Q6ZUJ8 805 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 RNF180Q86T96 592 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 CRYGNQ8WXF5 182 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 LENG1Q96BZ8 264 aaPredicted RBP17.65■□□□□ 0.42
DDB1-218ENST00000540784 GPRASP2Q96D09 838 aa17.65■□□□□ 0.42
DDB1-218ENST00000540784 MEIS1O00470 390 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 ARIH2O95376 493 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 PDCP20941 246 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 GJA9P57773 515 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 MTMR1Q13613 665 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 BECN1Q14457 450 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 GJC2Q5T442 439 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms