RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 FARP2O94887 1054 aaPredicted RBP12.11□□□□□ -0.47
ATL3-204ENST00000540699 SGPL1O95470 568 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 CFBP00751 764 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
ATL3-204ENST00000540699 CALML3P27482 149 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
ATL3-204ENST00000540699 KRT85P78386 507 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 TRIM29Q14134 588 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 TRPV1Q8NER1 839 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 HTATIP2Q9BUP3 242 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 GDPD2Q9HCC8 539 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 PAK6Q9NQU5 681 aaPredicted RBP12.11□□□□□ -0.47
ATL3-204ENST00000540699 SH3GLB2Q9NR46 395 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 VPS54Q9P1Q0 977 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 ELP1O95163 1332 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 TRAK2O60296 914 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 PRPF40AO75400 957 aaKnown RBP12.1□□□□□ -0.47
ATL3-204ENST00000540699 SNAI1O95863 264 aaPredicted RBP12.1□□□□□ -0.47
ATL3-204ENST00000540699 NAPAP54920 295 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 ARMCX2Q7L311 632 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
ATL3-204ENST00000540699 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
ATL3-204ENST00000540699 TAAR1Q96RJ0 339 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 IWS1Q96ST2 819 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 RMDN3Q96TC7 470 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 GLT8D2Q9H1C3 349 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 FOXP1Q9H334 677 aaPredicted RBP12.1□□□□□ -0.47
ATL3-204ENST00000540699 PSTPIP2Q9H939 334 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 HMX1Q9NP08 348 aaPredicted RBP12.1□□□□□ -0.47
ATL3-204ENST00000540699 RIC8AQ9NPQ8 531 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 PXMP2Q9NR77 195 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.1□□□□□ -0.47
ATL3-204ENST00000540699 KCNJ14Q9UNX9 436 aa12.1□□□□□ -0.47
ATL3-204ENST00000540699 FIBPO43427 364 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 ZNF865P0CJ78 1059 aaPredicted RBP12.09□□□□□ -0.47
ATL3-204ENST00000540699 CAPN2P17655 700 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 XBP1P17861 261 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 CCND3P30281 292 aaPredicted RBP12.09□□□□□ -0.47
ATL3-204ENST00000540699 HOXA13P31271 388 aaPredicted RBP12.09□□□□□ -0.47
ATL3-204ENST00000540699 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
ATL3-204ENST00000540699 MRPL12P52815 198 aaKnown RBP12.09□□□□□ -0.47
ATL3-204ENST00000540699 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 SLC17A8Q8NDX2 589 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 CCDC148Q8NFR7 591 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 CCDC12Q8WUD4 166 aaPredicted RBP12.09□□□□□ -0.47
ATL3-204ENST00000540699 CUL5Q93034 780 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 TNFRSF25Q93038 417 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 DEFB118Q96PH6 123 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 USP28Q96RU2 1077 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
ATL3-204ENST00000540699 ABHD16BQ9H3Z7 469 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 NR2E3Q9Y5X4 410 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 COL6A3P12111 3177 aa12.09□□□□□ -0.47
ATL3-204ENST00000540699 SMCO2A6NFE2 343 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 BTBD18B2RXH4 712 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 B4DLN1 442 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 SEPT4O43236 478 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 TFRCP02786 760 aaKnown RBP12.08□□□□□ -0.48
ATL3-204ENST00000540699 NCLP19338 710 aaKnown RBP12.08□□□□□ -0.48
ATL3-204ENST00000540699 ADCY7P51828 1080 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 ACVR2BQ13705 512 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 SAFBQ15424 915 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATL3-204ENST00000540699 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 KLHL40Q2TBA0 621 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 SKOR2Q2VWA4 1001 aaPredicted RBP12.08□□□□□ -0.48
ATL3-204ENST00000540699 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 GPT2Q8TD30 523 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 LEO1Q8WVC0 666 aaPredicted RBP12.08□□□□□ -0.48
ATL3-204ENST00000540699 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
ATL3-204ENST00000540699 MPHOSPH6Q99547 160 aaKnown RBP12.08□□□□□ -0.48
ATL3-204ENST00000540699 PDCD2LQ9BRP1 358 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 SCAND2PQ9GZW5 306 aaPredicted RBP12.08□□□□□ -0.48
ATL3-204ENST00000540699 PRO3102Q9H379 93 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 VTA1Q9NP79 307 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 RTEL1Q9NZ71 1219 aa12.08□□□□□ -0.48
ATL3-204ENST00000540699 TFIP11Q9UBB9 837 aaKnown RBP12.08□□□□□ -0.48
ATL3-204ENST00000540699 RBM47A0AV96 593 aaKnown RBP12.07□□□□□ -0.48
ATL3-204ENST00000540699 M0R2N6 131 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 MSCO60682 206 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 GADD45BO75293 160 aaPredicted RBP12.07□□□□□ -0.48
ATL3-204ENST00000540699 FOSP01100 380 aaPredicted RBP12.07□□□□□ -0.48
ATL3-204ENST00000540699 GNA11P29992 359 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 KRT2P35908 639 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 NASPP49321 788 aaPredicted RBP12.07□□□□□ -0.48
ATL3-204ENST00000540699 AP3B2Q13367 1082 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 PGM5Q15124 567 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 UBE2SQ16763 222 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 ARHGEF16Q5VV41 709 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 LHX8Q68G74 356 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 MCTP2Q6DN12 878 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 GALNT17Q6IS24 598 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 TAPT1Q6NXT6 567 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms