RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 ZNF233A6NK53 670 aa12.42□□□□□ -0.42
CPT1A-206ENST00000540367 TSPY2A6NKD2 308 aa12.42□□□□□ -0.42
CPT1A-206ENST00000540367 GLI1P08151 1106 aa12.42□□□□□ -0.42
CPT1A-206ENST00000540367 CARSP49589 748 aaKnown RBP12.42□□□□□ -0.42
CPT1A-206ENST00000540367 GSCP56915 257 aaPredicted RBP12.42□□□□□ -0.42
CPT1A-206ENST00000540367 MAN2A1Q16706 1144 aa12.42□□□□□ -0.42
CPT1A-206ENST00000540367 TXNRD1Q16881 649 aa12.42□□□□□ -0.42
CPT1A-206ENST00000540367 ASTE1Q2TB18 679 aaPredicted RBP12.42□□□□□ -0.42
CPT1A-206ENST00000540367 CENPPQ6IPU0 288 aa12.42□□□□□ -0.42
CPT1A-206ENST00000540367 MICALCLQ6ZW33 695 aa12.42□□□□□ -0.42
CPT1A-206ENST00000540367 YTHDF3Q7Z739 585 aaKnown RBP12.42□□□□□ -0.42
CPT1A-206ENST00000540367 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
CPT1A-206ENST00000540367 C8orf37Q96NL8 207 aa12.42□□□□□ -0.42
CPT1A-206ENST00000540367 HEXIM1O94992 359 aaKnown RBP12.41□□□□□ -0.42
CPT1A-206ENST00000540367 CYP2D6P10635 497 aa12.41□□□□□ -0.42
CPT1A-206ENST00000540367 NAP1L1P55209 391 aaKnown RBP12.41□□□□□ -0.42
CPT1A-206ENST00000540367 AMPD3Q01432 767 aa12.41□□□□□ -0.42
CPT1A-206ENST00000540367 NAA35Q5VZE5 725 aa12.41□□□□□ -0.42
CPT1A-206ENST00000540367 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
CPT1A-206ENST00000540367 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
CPT1A-206ENST00000540367 C1orf131Q8NDD1 294 aaKnown RBP12.41□□□□□ -0.42
CPT1A-206ENST00000540367 BAP1Q92560 729 aa12.41□□□□□ -0.42
CPT1A-206ENST00000540367 CABS1Q96KC9 395 aa12.41□□□□□ -0.42
CPT1A-206ENST00000540367 MMRN2Q9H8L6 949 aa12.41□□□□□ -0.42
CPT1A-206ENST00000540367 DCP1AQ9NPI6 582 aaPredicted RBP12.41□□□□□ -0.42
CPT1A-206ENST00000540367 NFU1Q9UMS0 254 aa12.41□□□□□ -0.42
CPT1A-206ENST00000540367 LOC102724428A0A0B4J2F2 783 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 SSU72P8A0A1W2PR75 194 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 OR52Z1P0C646 297 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 FAM153BP0C7A2 387 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.42
CPT1A-206ENST00000540367 NR1D1P20393 614 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 SIK1P57059 783 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 FAM153CQ494X1 144 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.42
CPT1A-206ENST00000540367 PIK3R5Q8WYR1 880 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 MS4A14Q96JA4 679 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
CPT1A-206ENST00000540367 FAM153AQ9UHL3 310 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 PPP1R37O75864 691 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 SLC1A4P43007 532 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 GUCY1A3Q02108 690 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 RASSF7Q02833 373 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 GUCY2DQ02846 1103 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
CPT1A-206ENST00000540367 PTGISQ16647 500 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 PDXDC1Q6P996 788 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 AMIGO3Q86WK7 504 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 ANKRD13CQ8N6S4 541 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 ZNF473Q8WTR7 871 aaKnown RBP12.4□□□□□ -0.42
CPT1A-206ENST00000540367 CRNKL1Q9BZJ0 848 aaKnown RBP12.4□□□□□ -0.42
CPT1A-206ENST00000540367 EPB41L5Q9HCM4 733 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 DOT1LQ8TEK3 1739 aa12.4□□□□□ -0.42
CPT1A-206ENST00000540367 LOC102724159A0A0B4J2E5 919 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 GRID2IPA4D2P6 1211 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 SRRM3A6NNA2 597 aaPredicted RBP12.39□□□□□ -0.43
CPT1A-206ENST00000540367 H0YHG0 523 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 RBAK-RBAKDNI3L0D1 243 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 STXBP3O00186 592 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 BUB1O43683 1085 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
CPT1A-206ENST00000540367 GRM4Q14833 912 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 PWP2Q15269 919 aaKnown RBP12.39□□□□□ -0.43
CPT1A-206ENST00000540367 SBK1Q52WX2 424 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 PARP10Q53GL7 1025 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 PNMA1Q8ND90 353 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 HPS3Q969F9 1004 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 EDEM3Q9BZQ6 932 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 SLC39A2Q9NP94 309 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 ATP8A2Q9NTI2 1148 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 BARHL2Q9NY43 387 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 TFCP2L1Q9NZI6 479 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 ESYT3A0FGR9 886 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 ZSCAN5CA6NGD5 496 aaPredicted RBP12.39□□□□□ -0.43
CPT1A-206ENST00000540367 MYO1FO00160 1098 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 FGFR1OPO95684 399 aaKnown RBP12.39□□□□□ -0.43
CPT1A-206ENST00000540367 GNAQP50148 359 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 DDR1Q08345 913 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 UBE4AQ14139 1066 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 HGSNATQ68CP4 663 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 HEATR3Q7Z4Q2 680 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 DGKHQ86XP1 1220 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 IFT81Q8WYA0 676 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 NSUN4Q96CB9 384 aaKnown RBP12.39□□□□□ -0.43
CPT1A-206ENST00000540367 ATP6V1G3Q96LB4 118 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 A1CFQ9NQ94 594 aaKnown RBP12.39□□□□□ -0.43
CPT1A-206ENST00000540367 GGA2Q9UJY4 613 aa12.39□□□□□ -0.43
CPT1A-206ENST00000540367 COL14A1Q05707 1796 aaKnown RBP12.39□□□□□ -0.43
CPT1A-206ENST00000540367 HMGB1P1B2RPK0 211 aaPredicted RBP12.38□□□□□ -0.43
CPT1A-206ENST00000540367 NTSR2O95665 410 aa12.38□□□□□ -0.43
CPT1A-206ENST00000540367 MDH1P40925 334 aaKnown RBP12.38□□□□□ -0.43
CPT1A-206ENST00000540367 SLC35G1Q2M3R5 365 aa12.38□□□□□ -0.43
CPT1A-206ENST00000540367 CAVIN4Q5BKX8 364 aa12.38□□□□□ -0.43
CPT1A-206ENST00000540367 ARHGAP27Q6ZUM4 889 aa12.38□□□□□ -0.43
CPT1A-206ENST00000540367 MYCBPAPQ8TBZ2 947 aa12.38□□□□□ -0.43
CPT1A-206ENST00000540367 CASKIN2Q8WXE0 1202 aa12.38□□□□□ -0.43
CPT1A-206ENST00000540367 MAD2L2Q9UI95 211 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms