RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SAP30BPQ9UHR5 308 aaKnown RBP9.6□□□□□ -0.87
DDB1-217ENST00000540166 SHANK3Q9BYB0 1731 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 ZNF609O15014 1411 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 RIC1Q4ADV7 1423 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 GOLGA6L10A0A0M3HER8 536 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 MACROD2A1Z1Q3 448 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 B4E1Z4 1266 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 SPAG1Q07617 926 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 NNTQ13423 1086 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 CST9Q5W186 159 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 MAPKAPK5Q8IW41 473 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 KRI1Q8N9T8 703 aaKnown RBP9.6□□□□□ -0.87
DDB1-217ENST00000540166 NAPBQ9H115 298 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 HAUS4Q9H6D7 363 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 SAMSN1Q9NSI8 373 aaKnown RBP9.6□□□□□ -0.87
DDB1-217ENST00000540166 LUC7L2Q9Y383 392 aaKnown RBP9.6□□□□□ -0.87
DDB1-217ENST00000540166 SLX4Q8IY92 1834 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 TNPO2O14787 897 aaKnown RBP9.6□□□□□ -0.87
DDB1-217ENST00000540166 POLR2DO15514 142 aaKnown RBP9.6□□□□□ -0.87
DDB1-217ENST00000540166 TACC1O75410 805 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 EGFRP00533 1210 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 XBP1P17861 261 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 SOX10P56693 466 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 CCDC96Q2M329 555 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 C8orf74Q6P047 294 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 KIRREL3Q8IZU9 778 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 ANKS4BQ8N8V4 417 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 WASF1Q92558 559 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 OSBP2Q969R2 916 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 ALS2CR12Q96Q35 445 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.6□□□□□ -0.87
DDB1-217ENST00000540166 GPAA1O43292 621 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 PRDX5P30044 214 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 KIF5BP33176 963 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 SLC39A14Q15043 492 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 CACNA2D3Q8IZS8 1091 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 TGFBRAP1Q8WUH2 860 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 PARK7Q99497 189 aaKnown RBP9.59□□□□□ -0.87
DDB1-217ENST00000540166 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.59□□□□□ -0.87
DDB1-217ENST00000540166 EHD4Q9H223 541 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 RNF186Q9NXI6 227 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 RTL9Q8NET4 1388 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 M0R2C6 588 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 GPR25O00155 361 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 IL1R1P14778 569 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 SMTNP53814 917 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 PKN2Q16513 984 aaKnown RBP9.59□□□□□ -0.87
DDB1-217ENST00000540166 ENOX1Q8TC92 643 aaKnown RBP9.59□□□□□ -0.87
DDB1-217ENST00000540166 DPF3Q92784 378 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 FZD1Q9UP38 647 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 CEP131Q9UPN4 1083 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 EPN1Q9Y6I3 576 aaPredicted RBP9.59□□□□□ -0.87
DDB1-217ENST00000540166 SYNRGQ9UMZ2 1314 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 ENO4A6NNW6 628 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 MINDY4BA8MYZ0 360 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 SYF2O95926 243 aaKnown RBP9.59□□□□□ -0.87
DDB1-217ENST00000540166 CLTAP09496 248 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 ZAP70P43403 619 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 AARSP49588 968 aaKnown RBP eCLIP9.59□□□□□ -0.87
DDB1-217ENST00000540166 EXOSC10Q01780 885 aaKnown RBP9.59□□□□□ -0.87
DDB1-217ENST00000540166 UBXN1Q04323 297 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 PREPLQ4J6C6 727 aaPredicted RBP9.59□□□□□ -0.87
DDB1-217ENST00000540166 HHIPL2Q6UWX4 724 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 RAD9BQ6WBX8 426 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 MAGEB6Q8N7X4 407 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 FAM151AQ8WW52 585 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 HHIPL1Q96JK4 782 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 SLC40A1Q9NP59 571 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 INCENPQ9NQS7 918 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 MCM9Q9NXL9 1143 aa9.59□□□□□ -0.87
DDB1-217ENST00000540166 MAGEB6P1A0A0J9YX57 407 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 WTIPA6NIX2 430 aaPredicted RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 SRGAP2O75044 1071 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 SKAP2O75563 359 aaPredicted RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 TFRCP02786 760 aaKnown RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 TRIM14Q14142 442 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 SPRYD7Q5W111 196 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 ZNF444Q8N0Y2 327 aaPredicted RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 APPBP2Q92624 585 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 SGSM3Q96HU1 749 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 A1CFQ9NQ94 594 aaKnown RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 HSPA8P11142 646 aaKnown RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 FDPSP14324 419 aaKnown RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 TRIM21P19474 475 aaKnown RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 ADORA1P30542 326 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 EPHB4P54760 987 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 ALS2CLQ60I27 953 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 HIBCHQ6NVY1 386 aaPredicted RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 KCNV1Q6PIU1 500 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 TJP1Q07157 1748 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 MFAP3LO75121 409 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 ARID4AP29374 1257 aaPredicted RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 CNGA1P29973 690 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 FKBP1AP62942 108 aaKnown RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 CCNA1P78396 465 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 CAPRIN2Q6IMN6 1127 aaKnown RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 FBXO33Q7Z6M2 555 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 IFT20Q8IY31 132 aa9.58□□□□□ -0.88
DDB1-217ENST00000540166 RPUSD2Q8IZ73 545 aaKnown RBP9.58□□□□□ -0.88
DDB1-217ENST00000540166 VTI1AQ96AJ9 217 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms