RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 HMGCS2P54868 508 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 RRAGBQ5VZM2 374 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 ARMCX5Q6P1M9 558 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 KRT26Q7Z3Y9 468 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 CPXCR1Q8N123 301 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 L3MBTL3Q96JM7 780 aaPredicted RBP19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 PYM1Q9BRP8 204 aaKnown RBP19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 BLZF1Q9H2G9 400 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 MRPL11Q9Y3B7 192 aaKnown RBP19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 ICAM1P05362 532 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 DPYDQ12882 1025 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 FBXO38Q6PIJ6 1188 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 TMC6Q7Z403 805 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 MMTAG2Q9BU76 263 aaKnown RBP19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 CCPG1Q9ULG6 757 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 CYP3A7-CYP3A51PA0A087WV96 503 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 POTEMA6NI47 508 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 GCOM1H8Y6P7 765 aaPredicted RBP19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 POLR2MP0CAP2 368 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 CYP3A7P24462 503 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 SREBF1P36956 1147 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 FXR2P51116 673 aaKnown RBP eCLIP19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 MCTP2Q6DN12 878 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 PPP1R13BQ96KQ4 1090 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 LRWD1Q9UFC0 647 aa19.17■□□□□ 0.66
PCDHB17P-201ENST00000539533 EPHX2P34913 555 aa19.16■□□□□ 0.66
PCDHB17P-201ENST00000539533 NOL9Q5SY16 702 aaKnown RBP19.16■□□□□ 0.66
PCDHB17P-201ENST00000539533 KRT222Q8N1A0 295 aa19.16■□□□□ 0.66
PCDHB17P-201ENST00000539533 SLC38A10Q9HBR0 1119 aa19.16■□□□□ 0.66
PCDHB17P-201ENST00000539533 PPP1R9AQ9ULJ8 1098 aa19.16■□□□□ 0.66
PCDHB17P-201ENST00000539533 ABCB11O95342 1321 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 MARCH6O60337 910 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 SFPQP23246 707 aaKnown RBP eCLIP19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 TPM4P67936 248 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 CUL4BQ13620 913 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 MORC3Q14149 939 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 TMEM266Q2M3C6 531 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 MBOAT7Q96N66 472 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 NAP1L4Q99733 375 aaKnown RBP19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 PHIPQ8WWQ0 1821 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 FAM86B1E9PN63 330 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 FAM86B2P0C5J1 330 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 PLCG1P19174 1290 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 VGLL4Q14135 290 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 WNK4Q96J92 1243 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 L2HGDHQ9H9P8 463 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 AFG3L2Q9Y4W6 797 aa19.15■□□□□ 0.66
PCDHB17P-201ENST00000539533 GLTPD2A6NH11 291 aa19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 KCNJ6P48051 423 aa19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 MAP3K9P80192 1104 aa19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 PDIA5Q14554 519 aa19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 NCAPHQ15003 741 aa19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 PRR16Q569H4 304 aa19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 USP50Q70EL3 339 aaPredicted RBP19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 CYP2W1Q8TAV3 490 aa19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 SNCAIPQ9Y6H5 919 aa19.14■□□□□ 0.66
PCDHB17P-201ENST00000539533 DHX8Q14562 1220 aaKnown RBP19.14■□□□□ 0.65
PCDHB17P-201ENST00000539533 MOXD1Q6UVY6 613 aa19.14■□□□□ 0.65
PCDHB17P-201ENST00000539533 NUDT12Q9BQG2 462 aa19.14■□□□□ 0.65
PCDHB17P-201ENST00000539533 KCNMB3Q9NPA1 279 aa19.14■□□□□ 0.65
PCDHB17P-201ENST00000539533 FAM53CQ9NYF3 392 aa19.14■□□□□ 0.65
PCDHB17P-201ENST00000539533 PCDHA12Q9UN75 941 aa19.14■□□□□ 0.65
PCDHB17P-201ENST00000539533 C19orf81C9J6K1 198 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 NFIBO00712 420 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 PPP1R12BO60237 982 aaPredicted RBP19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 ALAS1P13196 640 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 UBXN2AP68543 259 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 TERF2Q15554 542 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 TRIML1Q8N9V2 468 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 LENG9Q96B70 501 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 ATG4CQ96DT6 458 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 GTPBP6O43824 516 aaPredicted RBP19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 CLEC4DQ8WXI8 215 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 C12orf42Q96LP6 360 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 GSDMAQ96QA5 445 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 RAB34Q9BZG1 259 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 HOMER2Q9NSB8 354 aa19.13■□□□□ 0.65
PCDHB17P-201ENST00000539533 VWA5AO00534 786 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 NRDCO43847 1150 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 SYT10Q6XYQ8 523 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 CYP3A4P08684 503 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 CIITAP33076 1130 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 GRB10Q13322 594 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 Q4G0T1 1027 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 EAPPQ56P03 285 aaPredicted RBP19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 MOB2Q70IA6 237 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 ETNPPLQ8TBG4 499 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 CALML4Q96GE6 196 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 PNMA5Q96PV4 448 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 KBTBD4Q9NVX7 518 aa19.12■□□□□ 0.65
PCDHB17P-201ENST00000539533 POTECB2RU33 542 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 GRIN3BO60391 1043 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 ZBED4O75132 1171 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 ZNF76P36508 570 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 MUM1L1Q5H9M0 696 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 MLKLQ8NB16 471 aa19.11■□□□□ 0.65
PCDHB17P-201ENST00000539533 CDCA5Q96FF9 252 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms