RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 CALML3P27482 149 aa14.27□□□□□ -0.13
YBX3-207ENST00000539204 MRPL12P52815 198 aaKnown RBP14.27□□□□□ -0.13
YBX3-207ENST00000539204 TFAP4Q01664 338 aa14.27□□□□□ -0.13
YBX3-207ENST00000539204 CLUL1Q15846 466 aa14.27□□□□□ -0.13
YBX3-207ENST00000539204 RPAINQ86UA6 219 aa14.27□□□□□ -0.13
YBX3-207ENST00000539204 C7orf31Q8N865 590 aa14.27□□□□□ -0.13
YBX3-207ENST00000539204 YME1L1Q96TA2 773 aa14.27□□□□□ -0.13
YBX3-207ENST00000539204 FAM86C1Q9NVL1 165 aa14.27□□□□□ -0.13
YBX3-207ENST00000539204 TANC1Q9C0D5 1861 aa14.27□□□□□ -0.13
YBX3-207ENST00000539204 MYH4Q9Y623 1939 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 APPP05067 770 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 TDO2P48775 406 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 PTK7Q13308 1070 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 CTC1Q2NKJ3 1217 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 PPP4R3BQ5MIZ7 849 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 ZNF618Q5T7W0 954 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 FBXL6Q8N531 539 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 DBF4BQ8NFT6 615 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 AFG1LQ8WV93 481 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 HDAC6Q9UBN7 1215 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 GTF2IRD1Q9UHL9 959 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 DMDP11532 3685 aa14.26□□□□□ -0.13
YBX3-207ENST00000539204 EMSYQ7Z589 1322 aa14.25□□□□□ -0.13
YBX3-207ENST00000539204 NFIBO00712 420 aa14.25□□□□□ -0.13
YBX3-207ENST00000539204 ZXDAP98168 799 aa14.25□□□□□ -0.13
YBX3-207ENST00000539204 DLX2Q07687 328 aaPredicted RBP14.25□□□□□ -0.13
YBX3-207ENST00000539204 RNF207Q6ZRF8 634 aa14.25□□□□□ -0.13
YBX3-207ENST00000539204 FBXO11Q86XK2 927 aa14.25□□□□□ -0.13
YBX3-207ENST00000539204 KAT2BQ92831 832 aa14.25□□□□□ -0.13
YBX3-207ENST00000539204 STX8Q9UNK0 236 aa14.25□□□□□ -0.13
YBX3-207ENST00000539204 MMP3P08254 477 aa14.24□□□□□ -0.13
YBX3-207ENST00000539204 GNAT2P19087 354 aa14.24□□□□□ -0.13
YBX3-207ENST00000539204 SMAD4Q13485 552 aaKnown RBP14.24□□□□□ -0.13
YBX3-207ENST00000539204 TRAF7Q6Q0C0 670 aa14.24□□□□□ -0.13
YBX3-207ENST00000539204 DNERQ8NFT8 737 aa14.24□□□□□ -0.13
YBX3-207ENST00000539204 TOP1MTQ969P6 601 aa14.24□□□□□ -0.13
YBX3-207ENST00000539204 RANBP17Q9H2T7 1088 aaKnown RBP14.24□□□□□ -0.13
YBX3-207ENST00000539204 MYO7AQ13402 2215 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 RAB11FIP3O75154 756 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 UPP2O95045 317 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 ARIH2O95376 493 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 GH1P01241 217 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 SLC3A2P08195 630 aaKnown RBP14.23□□□□□ -0.13
YBX3-207ENST00000539204 EDNRBP24530 442 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 HYAL1Q12794 435 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 MBTPS1Q14703 1052 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 DGKDQ16760 1214 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 CHST3Q7LGC8 479 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 ERMP1Q7Z2K6 904 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 ALG1Q9BT22 464 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 KATNAL1Q9BW62 490 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 IGFLR1Q9H665 355 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 CD207Q9UJ71 328 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 MTMR7Q9Y216 660 aa14.23□□□□□ -0.13
YBX3-207ENST00000539204 CACNA1HO95180 2353 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 RSPH10B2B2RC85 870 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 PATL2C9JE40 543 aaKnown RBP14.22□□□□□ -0.13
YBX3-207ENST00000539204 RB1P06400 928 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 RSPH10BP0C881 870 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 AVPR2P30518 371 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 PSEN2P49810 448 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 RPS6P62753 249 aaKnown RBP14.22□□□□□ -0.13
YBX3-207ENST00000539204 LY6KQ17RY6 165 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 TRIM71Q2Q1W2 868 aaKnown RBP14.22□□□□□ -0.13
YBX3-207ENST00000539204 CCDC62Q6P9F0 684 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 SLC30A10Q6XR72 485 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 OSBP2Q969R2 916 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 LMAN2LQ9H0V9 348 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 PNMA2Q9UL42 364 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 PLIN4Q96Q06 1357 aa14.22□□□□□ -0.13
YBX3-207ENST00000539204 SLC16A2P36021 539 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 THPOP40225 353 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 SIGLEC14Q08ET2 396 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.13
YBX3-207ENST00000539204 ADAM15Q13444 863 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 CCDC96Q2M329 555 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 PLEKHG4Q58EX7 1191 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 TTBK2Q6IQ55 1244 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 SEPT14Q6ZU15 432 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 FIBCD1Q8N539 461 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 CLEC4DQ8WXI8 215 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 NACAP1Q9BZK3 213 aa14.21□□□□□ -0.13
YBX3-207ENST00000539204 EPB41L4AQ9HCS5 686 aaPredicted RBP14.21□□□□□ -0.13
YBX3-207ENST00000539204 ALG13Q9NP73 1137 aaKnown RBP14.21□□□□□ -0.13
YBX3-207ENST00000539204 PROB1E7EW31 1015 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 C5orf67F2Z3F1 127 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 H0Y858 1186 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 RBAK-RBAKDNI3L0D1 243 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 GPAA1O43292 621 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 RLBP1P12271 317 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 CTNNB1P35222 781 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 BMPR1AP36894 532 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 ZNF200P98182 395 aaPredicted RBP14.2□□□□□ -0.14
YBX3-207ENST00000539204 ARHGAP1Q07960 439 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 MFSD10Q14728 455 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 KIAA0753Q2KHM9 967 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 BTNL9Q6UXG8 535 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 DHX37Q8IY37 1157 aaKnown RBP14.2□□□□□ -0.14
YBX3-207ENST00000539204 DCAF4Q8WV16 495 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms