RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
PRPF19-203ENST00000539180 SMCO2A6NFE2 343 aa17.23■□□□□ 0.35
PRPF19-203ENST00000539180 NKRFO15226 690 aaKnown RBP eCLIP17.23■□□□□ 0.35
PRPF19-203ENST00000539180 DEXIO95424 95 aa17.23■□□□□ 0.35
PRPF19-203ENST00000539180 CCND2P30279 289 aa17.23■□□□□ 0.35
PRPF19-203ENST00000539180 SNX17Q15036 470 aa17.23■□□□□ 0.35
PRPF19-203ENST00000539180 RABEP1Q15276 862 aa17.23■□□□□ 0.35
PRPF19-203ENST00000539180 PCNX4Q63HM2 1172 aa17.23■□□□□ 0.35
PRPF19-203ENST00000539180 CPLX2Q6PUV4 134 aaKnown RBP17.23■□□□□ 0.35
PRPF19-203ENST00000539180 TRIM22Q8IYM9 498 aa17.23■□□□□ 0.35
PRPF19-203ENST00000539180 INPP4AQ96PE3 977 aaPredicted RBP17.23■□□□□ 0.35
PRPF19-203ENST00000539180 LTBP2Q14767 1821 aa17.23■□□□□ 0.35
PRPF19-203ENST00000539180 SCN10AQ9Y5Y9 1956 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 MOXD2PA6NHM9 499 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 ADAMTS3O15072 1205 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 STAM2O75886 525 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 CDKL5O76039 1030 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 C6orf222P0C671 652 aaPredicted RBP17.22■□□□□ 0.35
PRPF19-203ENST00000539180 AKAP17AQ02040 695 aaKnown RBP17.22■□□□□ 0.35
PRPF19-203ENST00000539180 SSRP1Q08945 709 aaKnown RBP17.22■□□□□ 0.35
PRPF19-203ENST00000539180 AP3B2Q13367 1082 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
PRPF19-203ENST00000539180 TSEN34Q9BSV6 310 aaKnown RBP17.22■□□□□ 0.35
PRPF19-203ENST00000539180 HTATIP2Q9BUP3 242 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 SH3GLB2Q9NR46 395 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 VPS54Q9P1Q0 977 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 PCDHA6Q9UN73 950 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 PCDHA8Q9Y5H6 950 aa17.22■□□□□ 0.35
PRPF19-203ENST00000539180 A0A1W2PQ45 241 aaPredicted RBP17.21■□□□□ 0.35
PRPF19-203ENST00000539180 A0A1W2PQY0 241 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 SPDYE3A6NKU9 549 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 MYCLP12524 364 aaPredicted RBP17.21■□□□□ 0.35
PRPF19-203ENST00000539180 SEMA3FQ13275 785 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 NPY5RQ15761 445 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 XRRA1Q6P2D8 792 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 SEPT14Q6ZU15 432 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 FAM177A1Q8N128 213 aaPredicted RBP17.21■□□□□ 0.35
PRPF19-203ENST00000539180 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
PRPF19-203ENST00000539180 AIFM3Q96NN9 605 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 ANO3Q9BYT9 981 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 SPC25Q9HBM1 224 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
PRPF19-203ENST00000539180 FOSP01100 380 aaPredicted RBP17.2■□□□□ 0.34
PRPF19-203ENST00000539180 TXNP10599 105 aaKnown RBP17.2■□□□□ 0.34
PRPF19-203ENST00000539180 ICAM3P32942 547 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 ACLYP53396 1101 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 BEX3Q00994 111 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 ARHGAP1Q07960 439 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 CRYGNQ8WXF5 182 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 COPS5Q92905 334 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 EMID1Q96A84 441 aaPredicted RBP17.2■□□□□ 0.34
PRPF19-203ENST00000539180 PGBD1Q96JS3 809 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 TMEM260Q9NX78 707 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 DDX41Q9UJV9 622 aaKnown RBP17.2■□□□□ 0.34
PRPF19-203ENST00000539180 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
PRPF19-203ENST00000539180 DYNC1LI2O43237 492 aaPredicted RBP17.19■□□□□ 0.34
PRPF19-203ENST00000539180 ASGR1P07306 291 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 FDPSP14324 419 aaKnown RBP17.19■□□□□ 0.34
PRPF19-203ENST00000539180 UBA1P22314 1058 aaKnown RBP17.19■□□□□ 0.34
PRPF19-203ENST00000539180 SREBF1P36956 1147 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 KCNA10Q16322 511 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 FSCN1Q16658 493 aaKnown RBP17.19■□□□□ 0.34
PRPF19-203ENST00000539180 LRRC26Q2I0M4 334 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 C1orf53Q5VUE5 145 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 REXO1Q8N1G1 1221 aaKnown RBP17.19■□□□□ 0.34
PRPF19-203ENST00000539180 PCSK9Q8NBP7 692 aaKnown RBP17.19■□□□□ 0.34
PRPF19-203ENST00000539180 DAGLBQ8NCG7 672 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 OR6J1Q8NGC5 347 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 ZFP91Q96JP5 570 aaPredicted RBP17.19■□□□□ 0.34
PRPF19-203ENST00000539180 SENP6Q9GZR1 1112 aaPredicted RBP17.19■□□□□ 0.34
PRPF19-203ENST00000539180 AP5M1Q9H0R1 490 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 C6orf50Q9HD87 102 aa17.19■□□□□ 0.34
PRPF19-203ENST00000539180 A6NJR5 290 aa17.18■□□□□ 0.34
PRPF19-203ENST00000539180 M0R2N6 131 aa17.18■□□□□ 0.34
PRPF19-203ENST00000539180 DTNBO60941 627 aa17.18■□□□□ 0.34
PRPF19-203ENST00000539180 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
PRPF19-203ENST00000539180 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
PRPF19-203ENST00000539180 GNA11P29992 359 aa17.18■□□□□ 0.34
PRPF19-203ENST00000539180 LY6KQ17RY6 165 aa17.18■□□□□ 0.34
PRPF19-203ENST00000539180 GNPTABQ3T906 1256 aa17.18■□□□□ 0.34
PRPF19-203ENST00000539180 EHMT1Q9H9B1 1298 aa17.18■□□□□ 0.34
PRPF19-203ENST00000539180 UBIAD1Q9Y5Z9 338 aa17.18■□□□□ 0.34
PRPF19-203ENST00000539180 SPATA31C2B4DYI2 1134 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 FIBPO43427 364 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 JAK2O60674 1132 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 GH1P01241 217 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 TGFB3P10600 412 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 ITGB5P18084 799 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 GNASQ5JWF2 1037 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 MCTP2Q6DN12 878 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 KCNV1Q6PIU1 500 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 SLC39A5Q6ZMH5 540 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 GPRASP2Q96D09 838 aa17.17■□□□□ 0.34
PRPF19-203ENST00000539180 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms