RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 A0A1W2PQ45 241 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 A0A1W2PQY0 241 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 WTIPA6NIX2 430 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PEX10O60683 326 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 MYBP10242 640 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 NOS3P29474 1203 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 IARSP41252 1262 aaKnown RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 GALK1P51570 392 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 MRPS9P82933 396 aaKnown RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PPP2R5DQ14738 602 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 DPY19L1Q2PZI1 675 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 NFXL1Q6ZNB6 911 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PHACTR4Q8IZ21 702 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PPP1R14CQ8TAE6 165 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 NPLOC4Q8TAT6 608 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 ELMO3Q96BJ8 720 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 TIFAQ96CG3 184 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 CCDC136Q96JN2 1154 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 KREMEN1Q96MU8 473 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 SLC12A5Q9H2X9 1139 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PRDM12Q9H4Q4 367 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 TRIM36Q9NQ86 728 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 ACSS2Q9NR19 701 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 FBXO10Q9UK96 956 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 EDARQ9UNE0 448 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF652Q9Y2D9 606 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHA8Q9Y5H6 950 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 WASHC2CQ9Y4E1 1318 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 H2AFYO75367 372 aaKnown RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 GLRX3O76003 335 aaKnown RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 KCNH1O95259 989 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 PRAMEF1O95521 474 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 SCGB1D2O95969 90 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 JMJD7P0C870 316 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 GFRA1P56159 465 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 BTKQ06187 659 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 DUSP4Q13115 394 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 GBX1Q14549 363 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 IFI16Q16666 785 aaKnown RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 DUOXA2Q1HG44 320 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 SV2CQ496J9 727 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ODR4Q5SWX8 454 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF765Q7L2R6 523 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FMNL3Q8IVF7 1028 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FRS2Q8WU20 508 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 COPS5Q92905 334 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 PPP1R14AQ96A00 147 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 MYRFLQ96LU7 910 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 GP6Q9HCN6 339 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 GFOD1Q9NXC2 390 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 PADI4Q9UM07 663 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TRBV23-1A0A0A0MS06 115 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TMEM82A0PJX8 343 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 HMX2A2RU54 273 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TRAF5O00463 557 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 WNT10BO00744 389 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 NRDCO43847 1150 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 MAFKO60675 156 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 THBDP07204 575 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 PABPC1P11940 636 aaKnown RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 COL6A1P12109 1028 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 PNLIPP16233 465 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 LTKP29376 864 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ARL1P40616 181 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ADCYAP1R1P41586 468 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 AUHQ13825 339 aaKnown RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TTF1Q15361 905 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 CCDC6Q16204 474 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 MAN2A1Q16706 1144 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 INAVAQ3KP66 663 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 HLA-DQA1Q5Y7H0 255 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 LETMD1Q6P1Q0 360 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 GALNT18Q6P9A2 607 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 HHIPL2Q6UWX4 724 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 DYMQ7RTS9 669 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 C14orf80Q86SX3 495 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 NLRP10Q86W26 655 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 SMC5Q8IY18 1101 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 BORCS6Q96GS4 357 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FCRL3Q96P31 734 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 DUSP23Q9BVJ7 150 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FAM53CQ9NYF3 392 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 CALCOCO1Q9P1Z2 691 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FNIP2Q9P278 1114 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 EID1Q9Y6B2 187 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 CAPN6Q9Y6Q1 641 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TCRBV16S1A1N1A0A5B0 115 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FAM170BA6NMN3 283 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 DVL2O14641 736 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 PRODHO43272 600 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TADA3O75528 432 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ALDH1L1O75891 902 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 SOAT2O75908 522 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 MED26O95402 600 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 CFBP00751 764 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TBX4P57082 545 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 GJA9P57773 515 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TNK2Q07912 1038 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 HDAC1Q13547 482 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 PDCD1Q15116 288 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms