RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 GRIPAP1Q4V328 841 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 TMTC3Q6ZXV5 915 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 NEK8Q86SG6 692 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 NELFCDQ8IXH7 590 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 RNPC3Q96LT9 517 aaKnown RBP7.5□□□□□ -1.21
SCAPER-203ENST00000538941 SLC40A1Q9NP59 571 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 ATP8A1Q9Y2Q0 1164 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 COL15A1P39059 1388 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 USP17L12C9JPN9 530 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 USP17L21D6R901 530 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 KRT14P02533 472 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 LRRC63Q05C16 580 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 CCDC38Q502W7 563 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 FAM133BQ5BKY9 247 aaKnown RBP7.5□□□□□ -1.21
SCAPER-203ENST00000538941 PHF20Q9BVI0 1012 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 UBXN6Q9BZV1 441 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 VCPKMTQ9H867 229 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 TOM1O60784 492 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 H2AFZP0C0S5 128 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 HERVK_113P62684 666 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 GFPT1Q06210 699 aaPredicted RBP7.5□□□□□ -1.21
SCAPER-203ENST00000538941 HERC4Q5GLZ8 1057 aaPredicted RBP7.5□□□□□ -1.21
SCAPER-203ENST00000538941 H2AFVQ71UI9 128 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 TEX11Q8IYF3 940 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 MGARPQ8TDB4 240 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 SENP2Q9HC62 589 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 CD248Q9HCU0 757 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 HAUS2Q9NVX0 235 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 C3P01024 1663 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 A0A1W2PQJ5 194 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 TOB1P50616 345 aaPredicted RBP7.5□□□□□ -1.21
SCAPER-203ENST00000538941 SMTNP53814 917 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 PTPROQ16827 1216 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 KRT26Q7Z3Y9 468 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 REXO1Q8N1G1 1221 aaKnown RBP7.5□□□□□ -1.21
SCAPER-203ENST00000538941 CABLES1Q8TDN4 633 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 U2AF1L4Q8WU68 220 aaKnown RBP7.5□□□□□ -1.21
SCAPER-203ENST00000538941 CYFIP2Q96F07 1278 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 AGPAT5Q9NUQ2 364 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 TBC1D7Q9P0N9 293 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 COL4A3BPQ9Y5P4 624 aa7.5□□□□□ -1.21
SCAPER-203ENST00000538941 SIGLEC1Q9BZZ2 1709 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 SMCO2A6NFE2 343 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 PRLRP16471 622 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 STX2P32856 288 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 BCAMP50895 628 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CADPS2Q86UW7 1296 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 C3orf20Q8ND61 904 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 NEK9Q8TD19 979 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 RASGRP4Q8TDF6 673 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 PIK3R5Q8WYR1 880 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 LARP4BQ92615 738 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 KLHL29Q96CT2 875 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 FMO2Q99518 471 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 NT5C3AQ9H0P0 336 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 SLC24A3Q9HC58 644 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 RBM12Q9NTZ6 932 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CEP72Q9P209 647 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 STK17AQ9UEE5 414 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CACNA1FO60840 1977 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 FAM205CA6NFA0 338 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 TFRCP02786 760 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 BMP6P22004 513 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 RASSF2P50749 326 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 MAGOHP61326 146 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 HDLBPQ00341 1268 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 TFAP4Q01664 338 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 TRIM68Q6AZZ1 485 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 TBC1D1Q86TI0 1168 aaPredicted RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 NBPF5PQ86XG9 351 aaPredicted RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 SLF2Q8IX21 1173 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CCDC13Q8IYE1 715 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 SYCP3Q8IZU3 236 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 PNMA1Q8ND90 353 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 AENQ8WTP8 325 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CAVIN3Q969G5 261 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 MAGOHBQ96A72 148 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 SH3GLB2Q9NR46 395 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 TFR2Q9UP52 801 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 KDM3AQ9Y4C1 1321 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 MYO5BQ9ULV0 1848 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 LRRD1A4D1F6 860 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CFAP73A6NFT4 308 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 HGSO14964 777 aaPredicted RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 MMEP08473 750 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 ADCY7P51828 1080 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 MXRA7P84157 204 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 FKBP3Q00688 224 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CEP128Q6ZU80 1094 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 DNAJC10Q8IXB1 793 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CCDC105Q8IYK2 499 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 ANKRD42Q8N9B4 389 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 STMN2Q93045 179 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 ARL8AQ96BM9 186 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 CHMP6Q96FZ7 201 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 NIP7Q9Y221 180 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 RIMS1Q86UR5 1692 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 FSBPO95073 299 aa7.49□□□□□ -1.21
SCAPER-203ENST00000538941 XRCC5P13010 732 aaKnown RBP7.49□□□□□ -1.21
SCAPER-203ENST00000538941 IFNAR2P48551 515 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms