RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 MIB1Q86YT6 1006 aa3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 DCP2Q8IU60 420 aaKnown RBP3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 CROTQ9UKG9 612 aa3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 MEIS3P2A8K0S8 358 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 SGSM2O43147 1006 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 CD247P20963 164 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 EIF4A3P38919 411 aaKnown RBP3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 IL12RB1P42701 662 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 SEPHS1P49903 392 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 XPCQ01831 940 aaPredicted RBP3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 AMER2Q8N7J2 671 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 ADCY4Q8NFM4 1077 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 ZCCHC14Q8WYQ9 949 aaKnown RBP3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 YIPF4Q9BSR8 244 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 BTG4Q9NY30 223 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 UBP1Q9NZI7 540 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 MARCH2Q9P0N8 246 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 IVNS1ABPQ9Y6Y0 642 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 NACADO15069 1562 aa3.51□□□□□ -1.85
CBX3P4-201ENST00000538909 AURKAO14965 403 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 NPHS1O60500 1241 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 GREM1O60565 184 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 VAMP4O75379 141 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 BRD1O95696 1058 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 NKX3-2P78367 333 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 CR1LQ2VPA4 569 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 TCTN3Q6NUS6 607 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 FAM126BQ8IXS8 530 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 KLHL36Q8N4N3 616 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 GIMAP8Q8ND71 665 aaPredicted RBP3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 ZNF296Q8WUU4 475 aaPredicted RBP3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 SMARCC1Q92922 1105 aaPredicted RBP3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 VOPP1Q96AW1 172 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 LRRC37BQ96QE4 947 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 ARID3AQ99856 593 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 FTSJ1Q9UET6 329 aa3.5□□□□□ -1.85
CBX3P4-201ENST00000538909 NPHP3-ACAD11A0A0J9YXS1 232 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 C7orf72A4D263 438 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 CNOT4O95628 575 aaKnown RBP3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 C1SP09871 688 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 PAMP19021 973 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 ZNF165P49910 485 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 APOBRQ0VD83 1088 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 NFATC3Q12968 1075 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 ANKRD39Q53RE8 183 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 TRMT10BQ6PF06 316 aaKnown RBP3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 MILR1Q7Z6M3 343 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 TEX2Q8IWB9 1127 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 SCUBE1Q8IWY4 988 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 REXO1Q8N1G1 1221 aaKnown RBP3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 CLIC6Q96NY7 704 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 BARX1Q9HBU1 254 aaPredicted RBP3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 VTI1BQ9UEU0 232 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 PCSK5Q92824 1860 aa3.49□□□□□ -1.85
CBX3P4-201ENST00000538909 C2orf71A6NGG8 1288 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 PLSCR1O15162 318 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 THBDP07204 575 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 TCEAL1Q15170 157 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 TMC4Q7Z404 712 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 LDLRAD3Q86YD5 345 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 PLEKHO2Q8TD55 490 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 SEC14L1Q92503 715 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 LMF1Q96S06 567 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 AGAP2Q99490 1192 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 KCNQ5Q9NR82 932 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 BACE2Q9Y5Z0 518 aa3.48□□□□□ -1.85
CBX3P4-201ENST00000538909 UNC13AQ9UPW8 1703 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 ANKRD33BA6NCL7 494 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 ADH4P08319 380 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 ZYXQ15942 572 aaKnown RBP3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 MBLAC2Q68D91 279 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 ERMP1Q7Z2K6 904 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 RALYLQ86SE5 291 aaKnown RBP3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 C1orf210Q8IVY1 113 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 DPF3Q92784 378 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 PLEKHG4BQ96PX9 1271 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 CLEC1BQ9P126 229 aa3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 DIS3Q9Y2L1 958 aaKnown RBP3.47□□□□□ -1.85
CBX3P4-201ENST00000538909 RB1CC1Q8TDY2 1594 aa3.46□□□□□ -1.85
CBX3P4-201ENST00000538909 C22orf46C9J442 243 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 CBFA2T2O43439 604 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 CYP7B1O75881 506 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 COMTP21964 271 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 PHF19Q5T6S3 580 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 AGBL4Q5VU57 503 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 INTS3Q68E01 1043 aaKnown RBP3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 TMC5Q6UXY8 1006 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 GPR155Q7Z3F1 870 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 MRGPRGQ86SM5 289 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 TAX1BP1Q86VP1 789 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 NUDT10Q8NFP7 164 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 LARP4BQ92615 738 aaKnown RBP3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 NKD1Q969G9 470 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 NUDT11Q96G61 164 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 MMRN2Q9H8L6 949 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 NGRNQ9NPE2 291 aaKnown RBP3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 ADAMTS1Q9UHI8 967 aa3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 TMEFF2Q9UIK5 374 aaPredicted RBP3.46□□□□□ -1.86
CBX3P4-201ENST00000538909 DMRT1Q9Y5R6 373 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms