RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ARMCX2Q7L311 632 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 MPHOSPH6Q99547 160 aaKnown RBP26.72■■□□□ 1.87
TMEM260-202ENST00000538838 RTEL1Q9NZ71 1219 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 ATP6V1DQ9Y5K8 247 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 FAM86B1E9PN63 330 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 GNRH1P01148 92 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 FAM86B2P0C5J1 330 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 HOXD10P28358 340 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 MCM7P33993 719 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 ZNF76P36508 570 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 ARHGEF6Q15052 776 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 ZNF174Q15697 407 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 CYP2W1Q8TAV3 490 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 MORC4Q8TE76 937 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 TNPO1Q92973 898 aaKnown RBP26.72■■□□□ 1.87
TMEM260-202ENST00000538838 USP28Q96RU2 1077 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 LOC102724159A0A0B4J2E5 919 aa26.71■■□□□ 1.87
TMEM260-202ENST00000538838 B4DLN1 442 aa26.71■■□□□ 1.87
TMEM260-202ENST00000538838 SLC37A4O43826 429 aa26.71■■□□□ 1.87
TMEM260-202ENST00000538838 CIITAP33076 1130 aa26.71■■□□□ 1.87
TMEM260-202ENST00000538838 PWP2Q15269 919 aaKnown RBP26.71■■□□□ 1.87
TMEM260-202ENST00000538838 STXBP2Q15833 593 aa26.71■■□□□ 1.87
TMEM260-202ENST00000538838 XRRA1Q6P2D8 792 aa26.71■■□□□ 1.87
TMEM260-202ENST00000538838 MAMDC4Q6UXC1 1216 aa26.71■■□□□ 1.87
TMEM260-202ENST00000538838 TINF2Q9BSI4 451 aa26.71■■□□□ 1.87
TMEM260-202ENST00000538838 ITGB5P18084 799 aa26.7■■□□□ 1.86
TMEM260-202ENST00000538838 CEBPZQ03701 1054 aaKnown RBP26.7■■□□□ 1.86
TMEM260-202ENST00000538838 OTOP1Q7RTM1 612 aa26.7■■□□□ 1.86
TMEM260-202ENST00000538838 ZNF396Q96N95 335 aaPredicted RBP26.7■■□□□ 1.86
TMEM260-202ENST00000538838 TRIM17Q9Y577 477 aa26.7■■□□□ 1.86
TMEM260-202ENST00000538838 UBIAD1Q9Y5Z9 338 aa26.7■■□□□ 1.86
TMEM260-202ENST00000538838 CLIC4Q9Y696 253 aa26.7■■□□□ 1.86
TMEM260-202ENST00000538838 IGLV3-22A0A075B6J6 115 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 XRCC5P13010 732 aaKnown RBP26.69■■□□□ 1.86
TMEM260-202ENST00000538838 GCFC2P16383 781 aaKnown RBP26.69■■□□□ 1.86
TMEM260-202ENST00000538838 CEP55Q53EZ4 464 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 PRR16Q569H4 304 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 OLFML2BQ68BL8 750 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 PPP4R3AQ6IN85 833 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 MOXD1Q6UVY6 613 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 EEPD1Q7L9B9 569 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 NAP1L4Q99733 375 aaKnown RBP26.69■■□□□ 1.86
TMEM260-202ENST00000538838 MXRA8Q9BRK3 442 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.69■■□□□ 1.86
TMEM260-202ENST00000538838 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.69■■□□□ 1.86
TMEM260-202ENST00000538838 TFIP11Q9UBB9 837 aaKnown RBP26.69■■□□□ 1.86
TMEM260-202ENST00000538838 DDX25Q9UHL0 483 aaKnown RBP26.69■■□□□ 1.86
TMEM260-202ENST00000538838 SYNGAP1Q96PV0 1343 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 DOCK5Q9H7D0 1870 aa26.69■■□□□ 1.86
TMEM260-202ENST00000538838 CYP3A7-CYP3A51PA0A087WV96 503 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 RGS20O76081 388 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 CYP3A7P24462 503 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 POTEDQ86YR6 584 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 FBXO16Q8IX29 292 aaPredicted RBP26.68■■□□□ 1.86
TMEM260-202ENST00000538838 TRIB2Q92519 343 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 LENG9Q96B70 501 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 MBOAT7Q96N66 472 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 EIF3JO75822 258 aaKnown RBP26.68■■□□□ 1.86
TMEM260-202ENST00000538838 NCLP19338 710 aaKnown RBP26.68■■□□□ 1.86
TMEM260-202ENST00000538838 CTCFP49711 727 aaPredicted RBP26.68■■□□□ 1.86
TMEM260-202ENST00000538838 LBX1P52954 281 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 IRF5Q13568 498 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 SF3A1Q15459 793 aaKnown RBP26.68■■□□□ 1.86
TMEM260-202ENST00000538838 ANO1Q5XXA6 986 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 MSL3Q8N5Y2 521 aaKnown RBP26.68■■□□□ 1.86
TMEM260-202ENST00000538838 INPP4AQ96PE3 977 aaPredicted RBP26.68■■□□□ 1.86
TMEM260-202ENST00000538838 WDR11Q9BZH6 1224 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 HTTP42858 3142 aa26.68■■□□□ 1.86
TMEM260-202ENST00000538838 NEMFO60524 1076 aa26.67■■□□□ 1.86
TMEM260-202ENST00000538838 STAM2O75886 525 aa26.67■■□□□ 1.86
TMEM260-202ENST00000538838 SNAI1O95863 264 aaPredicted RBP26.67■■□□□ 1.86
TMEM260-202ENST00000538838 CYP2C19P33261 490 aa26.67■■□□□ 1.86
TMEM260-202ENST00000538838 PLA2G4DQ86XP0 818 aa26.67■■□□□ 1.86
TMEM260-202ENST00000538838 JADE2Q9NQC1 790 aa26.67■■□□□ 1.86
TMEM260-202ENST00000538838 MEIS1O00470 390 aa26.66■■□□□ 1.86
TMEM260-202ENST00000538838 IGHA2P01877 340 aa26.66■■□□□ 1.86
TMEM260-202ENST00000538838 Q4G0T1 1027 aa26.66■■□□□ 1.86
TMEM260-202ENST00000538838 RAET1EQ8TD07 263 aa26.66■■□□□ 1.86
TMEM260-202ENST00000538838 ELNP15502 786 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 PRMT2P55345 433 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 KRT85P78386 507 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 ORC2Q13416 577 aaPredicted RBP26.65■■□□□ 1.86
TMEM260-202ENST00000538838 MTMR1Q13613 665 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 NIPA1Q7RTP0 329 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 UIMC1Q96RL1 719 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 KATNBL1Q9H079 304 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 TMEM60Q9H2L4 133 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 POLR3EQ9NVU0 708 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 CNPY2Q9Y2B0 182 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 MRVI1Q9Y6F6 885 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 ARP10275 920 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 SETQ01105 290 aaPredicted RBP26.65■■□□□ 1.86
TMEM260-202ENST00000538838 SEMA3FQ13275 785 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 ATL3Q6DD88 541 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 SEPT14Q6ZU15 432 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 NLRX1Q86UT6 975 aa26.65■■□□□ 1.86
TMEM260-202ENST00000538838 ADCY3O60266 1144 aa26.64■■□□□ 1.85
TMEM260-202ENST00000538838 NASPP49321 788 aaPredicted RBP26.64■■□□□ 1.85
TMEM260-202ENST00000538838 PTGDRQ13258 359 aa26.64■■□□□ 1.85
TMEM260-202ENST00000538838 PTPAQ15257 358 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms