RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SPATA32Q96LK8 384 aa19.62■□□□□ 0.73
CLN6-202ENST00000538696 SCAND2PQ9GZW5 306 aaPredicted RBP19.62■□□□□ 0.73
CLN6-202ENST00000538696 SLC5A4Q9NY91 659 aa19.62■□□□□ 0.73
CLN6-202ENST00000538696 FLRT1Q9NZU1 646 aa19.62■□□□□ 0.73
CLN6-202ENST00000538696 ELP1O95163 1332 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 CCDC194A0A1B0GVG4 234 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 XRCC5P13010 732 aaKnown RBP19.61■□□□□ 0.73
CLN6-202ENST00000538696 EDNRBP24530 442 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 SREBF1P36956 1147 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 PRMT2P55345 433 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 IRF5Q13568 498 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 NONOQ15233 471 aaKnown RBP eCLIP19.61■□□□□ 0.736e-7■■■□□ 17.3
CLN6-202ENST00000538696 KLHL40Q2TBA0 621 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 NOSTRINQ8IVI9 506 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 CRYGNQ8WXF5 182 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 EHMT1Q9H9B1 1298 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 CFAP45Q9UL16 551 aa19.61■□□□□ 0.73
CLN6-202ENST00000538696 IGHA2P01877 340 aa19.6■□□□□ 0.73
CLN6-202ENST00000538696 INF2Q27J81 1249 aa19.6■□□□□ 0.73
CLN6-202ENST00000538696 MORC4Q8TE76 937 aa19.6■□□□□ 0.73
CLN6-202ENST00000538696 TBCKQ8TEA7 893 aa19.6■□□□□ 0.73
CLN6-202ENST00000538696 TRIB2Q92519 343 aa19.6■□□□□ 0.73
CLN6-202ENST00000538696 CLIC4Q9Y696 253 aa19.6■□□□□ 0.73
CLN6-202ENST00000538696 LOC102724159A0A0B4J2E5 919 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 ASB14A6NK59 587 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 EDIL3O43854 480 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 NR3C2P08235 984 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 ARHGAP4P98171 946 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 PWP2Q15269 919 aaKnown RBP19.59■□□□□ 0.73
CLN6-202ENST00000538696 TPRNQ4KMQ1 711 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 OLFML2BQ68BL8 750 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 MAMDC4Q6UXC1 1216 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 ARMCX2Q7L311 632 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 IWS1Q96ST2 819 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 RTEL1Q9NZ71 1219 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 RCOR1Q9UKL0 485 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 PTCH2Q9Y6C5 1203 aa19.59■□□□□ 0.73
CLN6-202ENST00000538696 MBD3O95983 291 aa19.58■□□□□ 0.73
CLN6-202ENST00000538696 NASPP49321 788 aaPredicted RBP19.58■□□□□ 0.73
CLN6-202ENST00000538696 UBE2HP62256 183 aa19.58■□□□□ 0.73
CLN6-202ENST00000538696 ANO1Q5XXA6 986 aa19.58■□□□□ 0.73
CLN6-202ENST00000538696 PCNX4Q63HM2 1172 aa19.58■□□□□ 0.73
CLN6-202ENST00000538696 MSL3Q8N5Y2 521 aaKnown RBP19.58■□□□□ 0.73
CLN6-202ENST00000538696 RAET1EQ8TD07 263 aa19.58■□□□□ 0.73
CLN6-202ENST00000538696 ZFP91Q96JP5 570 aaPredicted RBP19.58■□□□□ 0.73
CLN6-202ENST00000538696 TINF2Q9BSI4 451 aa19.58■□□□□ 0.73
CLN6-202ENST00000538696 SYNGAP1Q96PV0 1343 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 CYP3A4P08684 503 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 MYCLP12524 364 aaPredicted RBP19.57■□□□□ 0.72
CLN6-202ENST00000538696 ELNP15502 786 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 CCND2P30279 289 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 MRPS9P82933 396 aaKnown RBP19.57■□□□□ 0.72
CLN6-202ENST00000538696 PDE4DQ08499 809 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 CTU1Q7Z7A3 348 aaKnown RBP19.57■□□□□ 0.72
CLN6-202ENST00000538696 VSIG10LQ86VR7 867 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 MPHOSPH6Q99547 160 aaKnown RBP19.57■□□□□ 0.72
CLN6-202ENST00000538696 POLR3EQ9NVU0 708 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.57■□□□□ 0.72
CLN6-202ENST00000538696 PTPN22Q9Y2R2 807 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 DOCK5Q9H7D0 1870 aa19.57■□□□□ 0.72
CLN6-202ENST00000538696 WNT7AO00755 349 aa19.56■□□□□ 0.72
CLN6-202ENST00000538696 ADCY3O60266 1144 aa19.56■□□□□ 0.72
CLN6-202ENST00000538696 YEATS4O95619 227 aa19.56■□□□□ 0.72
CLN6-202ENST00000538696 SNAI1O95863 264 aaPredicted RBP19.56■□□□□ 0.72
CLN6-202ENST00000538696 TOB1P50616 345 aaPredicted RBP19.56■□□□□ 0.72
CLN6-202ENST00000538696 STK38Q15208 465 aa19.56■□□□□ 0.72
CLN6-202ENST00000538696 NEK8Q86SG6 692 aa19.56■□□□□ 0.72
CLN6-202ENST00000538696 KATNBL1Q9H079 304 aa19.56■□□□□ 0.72
CLN6-202ENST00000538696 GZF1Q9H116 711 aaPredicted RBP19.56■□□□□ 0.72
CLN6-202ENST00000538696 B4DLN1 442 aa19.55■□□□□ 0.72
CLN6-202ENST00000538696 CYP2C19P33261 490 aa19.55■□□□□ 0.72
CLN6-202ENST00000538696 STXBP2Q15833 593 aa19.55■□□□□ 0.72
CLN6-202ENST00000538696 XRRA1Q6P2D8 792 aa19.55■□□□□ 0.72
CLN6-202ENST00000538696 FBXO16Q8IX29 292 aaPredicted RBP19.55■□□□□ 0.72
CLN6-202ENST00000538696 TRMT44Q8IYL2 757 aaKnown RBP19.55■□□□□ 0.72
CLN6-202ENST00000538696 LINC00301Q8NCQ3 95 aa19.55■□□□□ 0.72
CLN6-202ENST00000538696 PXYLP1Q8TE99 480 aa19.55■□□□□ 0.72
CLN6-202ENST00000538696 PRDM10Q9NQV6 1147 aa19.55■□□□□ 0.72
CLN6-202ENST00000538696 UBIAD1Q9Y5Z9 338 aa19.55■□□□□ 0.72
CLN6-202ENST00000538696 RGS20O76081 388 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 TDP2O95551 362 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 CIITAP33076 1130 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 USP11P51784 963 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 TRIM32Q13049 653 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 PTPAQ15257 358 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 SF3A1Q15459 793 aaKnown RBP19.54■□□□□ 0.72
CLN6-202ENST00000538696 LETM2Q2VYF4 491 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 CAVIN1Q6NZI2 390 aaKnown RBP19.54■□□□□ 0.72
CLN6-202ENST00000538696 EEPD1Q7L9B9 569 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 SLAIN1Q8ND83 568 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 NOL7Q9UMY1 257 aaKnown RBP19.54■□□□□ 0.72
CLN6-202ENST00000538696 FRMPD3Q5JV73 1810 aa19.54■□□□□ 0.72
CLN6-202ENST00000538696 FAM86B1E9PN63 330 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 EIF3JO75822 258 aaKnown RBP19.53■□□□□ 0.72
CLN6-202ENST00000538696 HMGCRP04035 888 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 FAM86B2P0C5J1 330 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 ITGB5P18084 799 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 RILPL1Q5EBL4 403 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 MFSD14CQ5VZR4 134 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 MOXD1Q6UVY6 613 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms