RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RRAGAQ7L523 313 aa20.52■□□□□ 0.87
SFSWAP-207ENST00000538548 ARMC9Q7Z3E5 817 aa20.52■□□□□ 0.87
SFSWAP-207ENST00000538548 TAX1BP1Q86VP1 789 aa20.52■□□□□ 0.87
SFSWAP-207ENST00000538548 FAM228AQ86W67 206 aa20.52■□□□□ 0.87
SFSWAP-207ENST00000538548 NDST4Q9H3R1 872 aa20.52■□□□□ 0.87
SFSWAP-207ENST00000538548 SSU72P8A0A1W2PR75 194 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 CCDC189A1A4V9 331 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 DNM1LO00429 736 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 PDHBP11177 359 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 IFFO1Q0D2I5 559 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 CRYMQ14894 314 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 SLC8A1P32418 973 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 SLC1A4P43007 532 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 GFPT1Q06210 699 aaPredicted RBP20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 CCDC178Q5BJE1 867 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 BLIDQ8IZY5 108 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 P3H4Q92791 437 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 PLIN2Q99541 437 aa20.51■□□□□ 0.87
SFSWAP-207ENST00000538548 SMIM22K7EJ46 135 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 BIRC3Q13489 604 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 BAP1Q92560 729 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 FAM212AQ96EL1 285 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 TRIM9Q9C026 710 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 TAF1DQ9H5J8 278 aaPredicted RBP20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 MMRN2Q9H8L6 949 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 TPX2Q9ULW0 747 aaKnown RBP20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 DLEC1Q9Y238 1755 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 C5orf60A6NFR6 353 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 RBAK-RBAKDNI3L0D1 243 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 TNNC1P63316 161 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 LACTB2Q53H82 288 aaPredicted RBP20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 COBLL1Q53SF7 1204 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 TEX11Q8IYF3 940 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 LRRC15Q8TF66 581 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 INPP4AQ96PE3 977 aaPredicted RBP20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 HAUS2Q9NVX0 235 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 LRP2BPQ9P2M1 347 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 LRP5O75197 1615 aa20.5■□□□□ 0.87
SFSWAP-207ENST00000538548 MYBP10242 640 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 XRCC4Q13426 336 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 TRADDQ15628 312 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 SPRED3Q2MJR0 410 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 SEC16BQ96JE7 1060 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 ISCUQ9H1K1 167 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 ABCB11O95342 1321 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 FAM205AQ6ZU69 1335 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 PDE8AO60658 829 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 PCP11498 1178 aaKnown RBP20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 HSD17B3P37058 310 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 SCTRP47872 440 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 SATB1Q01826 763 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 MAN2A1Q16706 1144 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 RUFY4Q6ZNE9 571 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 CACNA2D3Q8IZS8 1091 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 SCLT1Q96NL6 688 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 ATP6V0A4Q9HBG4 840 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 LEMD3Q9Y2U8 911 aa20.49■□□□□ 0.87
SFSWAP-207ENST00000538548 H0YGN5 161 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 RAD51CO43502 376 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 PALMO75781 387 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 PAEPP09466 180 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 CYP7A1P22680 504 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 ASIC1P78348 528 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 PDXDC1Q6P996 788 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 LRRC45Q96CN5 670 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 C7orf25Q9BPX7 421 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 EDEM3Q9BZQ6 932 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 TMEM60Q9H2L4 133 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 NFS1Q9Y697 457 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 FCER1AP12319 257 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 ERCC3P19447 782 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 CUL1Q13616 776 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 QPCTQ16769 361 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 CARD10Q9BWT7 1032 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 LUC7LQ9NQ29 371 aaKnown RBP20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 PCDHA4Q9UN74 947 aa20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.48■□□□□ 0.87
SFSWAP-207ENST00000538548 A0A1B0GUA9 196 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 SSBP05455 408 aaKnown RBP eCLIP20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 FGRP09769 529 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 HGSNATQ68CP4 663 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 CENPPQ6IPU0 288 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 CNNM4Q6P4Q7 775 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 SEMA6BQ9H3T3 888 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 MAGEB6P1A0A0J9YX57 407 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 LAD1O00515 517 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 PLCG1P19174 1290 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 HLTFQ14527 1009 aaKnown RBP eCLIP20.47■□□□□ 0.873e-7■■■■■ 26.9
SFSWAP-207ENST00000538548 HLFQ16534 295 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 NBPF9Q3BBW0 867 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 MEI1Q5TIA1 1274 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 ARHGAP27Q6ZUM4 889 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 ADGRA1Q86SQ6 560 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 USP38Q8NB14 1042 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 FAXDC2Q96IV6 333 aa20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 TRMT112Q9UI30 125 aaKnown RBP20.47■□□□□ 0.87
SFSWAP-207ENST00000538548 MGRN1O60291 552 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 PPP2R2AP63151 447 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms