RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZNHIT6Q9NWK9 470 aaKnown RBP27.73■■■□□ 2.03
RAB40C-204ENST00000538492 ARFGEF1Q9Y6D6 1849 aa27.73■■■□□ 2.03
RAB40C-204ENST00000538492 SH3BP5LQ7L8J4 393 aa27.72■■■□□ 2.03
RAB40C-204ENST00000538492 GUF1Q8N442 669 aaKnown RBP27.72■■■□□ 2.03
RAB40C-204ENST00000538492 ERGIC2Q96RQ1 377 aa27.72■■■□□ 2.03
RAB40C-204ENST00000538492 NHEJ1Q9H9Q4 299 aaPredicted RBP27.72■■■□□ 2.03
RAB40C-204ENST00000538492 ATF5Q9Y2D1 282 aaPredicted RBP27.72■■■□□ 2.03
RAB40C-204ENST00000538492 SIPA1L1O43166 1804 aa27.72■■■□□ 2.03
RAB40C-204ENST00000538492 SNAP25P60880 206 aa27.72■■■□□ 2.03
RAB40C-204ENST00000538492 SEPT2Q15019 361 aa27.72■■■□□ 2.03
RAB40C-204ENST00000538492 CCDC122Q5T0U0 273 aa27.72■■■□□ 2.03
RAB40C-204ENST00000538492 SLFN13Q68D06 897 aa27.72■■■□□ 2.03
RAB40C-204ENST00000538492 SCN9AQ15858 1988 aa27.71■■■□□ 2.03
RAB40C-204ENST00000538492 PLA2G4AP47712 749 aa27.71■■■□□ 2.03
RAB40C-204ENST00000538492 UTP14CQ5TAP6 766 aaKnown RBP27.71■■■□□ 2.03
RAB40C-204ENST00000538492 TRIM34Q9BYJ4 488 aa27.71■■■□□ 2.03
RAB40C-204ENST00000538492 PI4KBQ9UBF8 816 aa27.71■■■□□ 2.03
RAB40C-204ENST00000538492 GABPB1Q06547 395 aaPredicted RBP27.71■■■□□ 2.03
RAB40C-204ENST00000538492 CDC37Q16543 378 aaPredicted RBP27.71■■■□□ 2.03
RAB40C-204ENST00000538492 KIAA1328Q86T90 577 aa27.71■■■□□ 2.03
RAB40C-204ENST00000538492 HAUS4Q9H6D7 363 aa27.71■■■□□ 2.03
RAB40C-204ENST00000538492 ENC1O14682 589 aa27.7■■■□□ 2.03
RAB40C-204ENST00000538492 APBA3O96018 575 aa27.7■■■□□ 2.03
RAB40C-204ENST00000538492 VWA3BQ502W6 1294 aa27.7■■■□□ 2.03
RAB40C-204ENST00000538492 DHX36Q9H2U1 1008 aaKnown RBP27.7■■■□□ 2.03
RAB40C-204ENST00000538492 NDST4Q9H3R1 872 aa27.7■■■□□ 2.03
RAB40C-204ENST00000538492 KANSL2Q9H9L4 492 aa27.7■■■□□ 2.03
RAB40C-204ENST00000538492 GDF11O95390 407 aa27.7■■■□□ 2.02
RAB40C-204ENST00000538492 GCFC2P16383 781 aaKnown RBP27.7■■■□□ 2.02
RAB40C-204ENST00000538492 TUBB2AQ13885 445 aa27.7■■■□□ 2.02
RAB40C-204ENST00000538492 TUBB2BQ9BVA1 445 aa27.7■■■□□ 2.02
RAB40C-204ENST00000538492 FAM207AQ9NSI2 230 aaPredicted RBP27.7■■■□□ 2.02
RAB40C-204ENST00000538492 PRDM4Q9UKN5 801 aa27.7■■■□□ 2.02
RAB40C-204ENST00000538492 E9PMD0 336 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 ECE2O60344 883 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 SASH3O75995 380 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 TBC1D8O95759 1140 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 EHHADHQ08426 723 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 DACT2Q5SW24 774 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 C2CD5Q86YS7 1000 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 ANKZF1Q9H8Y5 726 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 CYLC1P35663 651 aaPredicted RBP27.69■■■□□ 2.02
RAB40C-204ENST00000538492 KRT83P78385 493 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 STRIP1Q5VSL9 837 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 SIAH1Q8IUQ4 282 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 DNAJC19Q96DA6 116 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 LRRC27Q9C0I9 530 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 ARFGAP3Q9NP61 516 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 TBC1D7Q9P0N9 293 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 MYO6Q9UM54 1294 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 KIAA1024Q9UPX6 916 aa27.69■■■□□ 2.02
RAB40C-204ENST00000538492 EPHB6O15197 1021 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 CYP27A1Q02318 531 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 COASYQ13057 564 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 NCAPH2Q6IBW4 605 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 MKL1Q969V6 931 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 HDAC6Q9UBN7 1215 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 RCCD1A6NED2 376 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 AMPD2Q01433 879 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 ICA1Q05084 483 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 GPIHBP1Q8IV16 184 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 ANO3Q9BYT9 981 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 LACRTQ9GZZ8 138 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 NYAP2Q9P242 653 aa27.68■■■□□ 2.02
RAB40C-204ENST00000538492 PLEKP08567 350 aaPredicted RBP27.67■■■□□ 2.02
RAB40C-204ENST00000538492 LRRC63Q05C16 580 aa27.67■■■□□ 2.02
RAB40C-204ENST00000538492 DCAF4Q8WV16 495 aa27.67■■■□□ 2.02
RAB40C-204ENST00000538492 JAKMIP2Q96AA8 810 aa27.67■■■□□ 2.02
RAB40C-204ENST00000538492 CACNB1Q02641 598 aaPredicted RBP27.67■■■□□ 2.02
RAB40C-204ENST00000538492 LRRC55Q6ZSA7 311 aa27.67■■■□□ 2.02
RAB40C-204ENST00000538492 IDI2Q9BXS1 227 aa27.67■■■□□ 2.02
RAB40C-204ENST00000538492 MMRN2Q9H8L6 949 aa27.67■■■□□ 2.02
RAB40C-204ENST00000538492 PANK4Q9NVE7 773 aa27.67■■■□□ 2.02
RAB40C-204ENST00000538492 POTEB3A0JP26 581 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 POTECB2RU33 542 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 IPO7O95373 1038 aaKnown RBP27.66■■■□□ 2.02
RAB40C-204ENST00000538492 STAT3P40763 770 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 RAD51AP2Q09MP3 1159 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 PSMD2Q13200 908 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 MAN2A1Q16706 1144 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 WHAMMP3Q1A5X7 153 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 FIGNQ5HY92 759 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 POTEBQ6S5H4 581 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 FGFBP2Q9BYJ0 223 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 ZHX1Q9UKY1 873 aaPredicted RBP27.66■■■□□ 2.02
RAB40C-204ENST00000538492 SIK3Q9Y2K2 1263 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 A0A1W2PQJ5 194 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 CTAGE15A4D2H0 777 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 RHOXF2BP0C7M4 288 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 CTAGE8P0CG41 777 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 USH1GQ495M9 461 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 CTAGE6Q86UF2 777 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 CTAGE4Q8IX94 777 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 MYOCDQ8IZQ8 938 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 PNKPQ96T60 521 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 RHOXF2Q9BQY4 288 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 DUSP10Q9Y6W6 482 aa27.66■■■□□ 2.02
RAB40C-204ENST00000538492 NPHP3-ACAD11A0A0J9YXS1 232 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 PSMD14O00487 310 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 FGFR1OPO95684 399 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms