RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TTBK2Q6IQ55 1244 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 HDAC11Q96DB2 347 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 TUBGCP2Q9BSJ2 902 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 SF3A3Q12874 501 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■□□ 17.8
SCARB1-205ENST00000538291 FAM160B2Q86V87 743 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 DHTKD1Q96HY7 919 aaPredicted RBP18.3■□□□□ 0.52
SCARB1-205ENST00000538291 VCX3AQ9NNX9 186 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 CPSF3Q9UKF6 684 aaKnown RBP18.3■□□□□ 0.52
SCARB1-205ENST00000538291 ATP8B3O60423 1300 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 RNF123Q5XPI4 1314 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 NPR1P16066 1061 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 ADD2P35612 726 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 ARHGAP42A6NI28 874 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 KIF3CO14782 793 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 MESDQ14696 234 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 TBCKQ8TEA7 893 aa18.3■□□□□ 0.52
SCARB1-205ENST00000538291 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
SCARB1-205ENST00000538291 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-205ENST00000538291 USP17L3A6NCW0 530 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 USP17L4A6NCW7 530 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 PPP6R2O75170 966 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 AFPP02771 609 aaKnown RBP18.29■□□□□ 0.52
SCARB1-205ENST00000538291 SLC39A14Q15043 492 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 JADE1Q6IE81 842 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 USP17L1Q7RTZ2 530 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 OAS2P29728 719 aaKnown RBP18.29■□□□□ 0.52
SCARB1-205ENST00000538291 TFAMQ00059 246 aaKnown RBP18.29■□□□□ 0.52
SCARB1-205ENST00000538291 RASGRP4Q8TDF6 673 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 SLC38A10Q9HBR0 1119 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 STAP2Q9UGK3 403 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 ABCC12Q96J65 1359 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 IRX4P78413 519 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 ZNF526Q8TF50 670 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-205ENST00000538291 EFCC1Q9HA90 598 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 KIF9Q9HAQ2 790 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-205ENST00000538291 SLC10A4Q96EP9 437 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
SCARB1-205ENST00000538291 HMGB1P1B2RPK0 211 aaPredicted RBP18.28■□□□□ 0.52
SCARB1-205ENST00000538291 PDE1BQ01064 536 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 CCDC38Q502W7 563 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 FAM182BQ5T319 152 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 NLRP10Q86W26 655 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 PI4K2BQ8TCG2 481 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
SCARB1-205ENST00000538291 PSAPP07602 524 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 RNF10Q8N5U6 811 aaKnown RBP18.28■□□□□ 0.52
SCARB1-205ENST00000538291 MYRIPQ8NFW9 859 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 ANGPTL3Q9Y5C1 460 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 RGS12O14924 1447 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 MED7O43513 233 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 MYO1EQ12965 1108 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 PNMA3Q9UL41 463 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 ATF5Q9Y2D1 282 aaPredicted RBP18.28■□□□□ 0.52
SCARB1-205ENST00000538291 M0R2C6 588 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 EEF1GP26641 437 aaKnown RBP18.28■□□□□ 0.52
SCARB1-205ENST00000538291 PARD3BQ8TEW8 1205 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 LRRC4Q9HBW1 653 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 FAM114A2Q9NRY5 505 aa18.28■□□□□ 0.52
SCARB1-205ENST00000538291 GPC4O75487 556 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 ARPP19P56211 112 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 GRAPQ13588 217 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 ELMSAN1Q6PJG2 1045 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 TTLL6Q8N841 843 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 GRAPLQ8TC17 118 aaPredicted RBP18.27■□□□□ 0.52
SCARB1-205ENST00000538291 MTERF2Q49AM1 385 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 FOXP4Q8IVH2 680 aaPredicted RBP18.27■□□□□ 0.52
SCARB1-205ENST00000538291 P2RX5Q93086 422 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 ZNF653Q96CK0 615 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 MRFAP1L1Q96HT8 127 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 HAUS8Q9BT25 410 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 ARL4AP40617 200 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 EEPD1Q7L9B9 569 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 RAB44Q7Z6P3 723 aaPredicted RBP18.27■□□□□ 0.52
SCARB1-205ENST00000538291 TTC1Q99614 292 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 TLR7Q9NYK1 1049 aaKnown RBP18.27■□□□□ 0.52
SCARB1-205ENST00000538291 IGSF1Q8N6C5 1336 aa18.27■□□□□ 0.52
SCARB1-205ENST00000538291 SGK1O00141 431 aa18.27■□□□□ 0.51
SCARB1-205ENST00000538291 MAPK4P31152 587 aa18.27■□□□□ 0.51
SCARB1-205ENST00000538291 EHHADHQ08426 723 aa18.27■□□□□ 0.51
SCARB1-205ENST00000538291 PGBD1Q96JS3 809 aa18.27■□□□□ 0.51
SCARB1-205ENST00000538291 GOLGA8KD6RF30 607 aa18.27■□□□□ 0.51
SCARB1-205ENST00000538291 PCDHA5Q9Y5H7 936 aa18.27■□□□□ 0.51
SCARB1-205ENST00000538291 INHBAP08476 426 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 RASSF7Q02833 373 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 DBN1Q16643 649 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 LCORLQ8N3X6 602 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 C7orf31Q8N865 590 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 CCNYQ8ND76 341 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 HVCN1Q96D96 273 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 COA1Q9GZY4 146 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 HEXIM1O94992 359 aaKnown RBP18.26■□□□□ 0.51
SCARB1-205ENST00000538291 ANKRD13CQ8N6S4 541 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 GOLGA8SH3BPF8 625 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 CYP21A2P08686 494 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 FKBP3Q00688 224 aaKnown RBP18.26■□□□□ 0.51
SCARB1-205ENST00000538291 SURF1Q15526 300 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms