RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 SRBD1Q8N5C6 995 aaKnown RBP24.77■■□□□ 1.56
CCDC78-215ENST00000538176 KIAA1217Q5T5P2 1943 aa24.76■■□□□ 1.55
CCDC78-215ENST00000538176 MYCLP12524 364 aaPredicted RBP24.76■■□□□ 1.55
CCDC78-215ENST00000538176 RCAN1P53805 252 aa24.76■■□□□ 1.55
CCDC78-215ENST00000538176 FAM109BQ6ICB4 259 aaPredicted RBP24.76■■□□□ 1.55
CCDC78-215ENST00000538176 XRRA1Q6P2D8 792 aa24.76■■□□□ 1.55
CCDC78-215ENST00000538176 FCHSD1Q86WN1 690 aa24.76■■□□□ 1.55
CCDC78-215ENST00000538176 RASEFQ8IZ41 740 aa24.76■■□□□ 1.55
CCDC78-215ENST00000538176 COPS5Q92905 334 aa24.76■■□□□ 1.55
CCDC78-215ENST00000538176 KCNB2Q92953 911 aa24.76■■□□□ 1.55
CCDC78-215ENST00000538176 ALDH8A1Q9H2A2 487 aaPredicted RBP24.76■■□□□ 1.55
CCDC78-215ENST00000538176 HSPA4P34932 840 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 PSMC6P62333 389 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 DGKDQ16760 1214 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 GNPTABQ3T906 1256 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 APOA5Q6Q788 366 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 SMARCC2Q8TAQ2 1214 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 PIBF1Q8WXW3 757 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 LRRC2Q9BYS8 371 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 HIPK3Q9H422 1215 aa24.75■■□□□ 1.55
CCDC78-215ENST00000538176 B4GALT4O60513 344 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 PLEKHA8P1O95397 391 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 FGD1P98174 961 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 ARHGAP1Q07960 439 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 C9orf50Q5SZB4 431 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 TMTC3Q6ZXV5 915 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 MICU3Q86XE3 530 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 DHX37Q8IY37 1157 aaKnown RBP24.74■■□□□ 1.55
CCDC78-215ENST00000538176 AFG1LQ8WV93 481 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 LAMA3Q16787 3333 aa24.74■■□□□ 1.55
CCDC78-215ENST00000538176 ZBTB43O43298 467 aa24.73■■□□□ 1.55
CCDC78-215ENST00000538176 MMP3P08254 477 aa24.73■■□□□ 1.55
CCDC78-215ENST00000538176 SMAD3P84022 425 aaKnown RBP24.73■■□□□ 1.55
CCDC78-215ENST00000538176 NBPF20Q3BBV1 942 aa24.73■■□□□ 1.55
CCDC78-215ENST00000538176 ADCK5Q3MIX3 580 aa24.73■■□□□ 1.55
CCDC78-215ENST00000538176 PPTC7Q8NI37 304 aa24.73■■□□□ 1.55
CCDC78-215ENST00000538176 RNPC3Q96LT9 517 aaKnown RBP24.73■■□□□ 1.55
CCDC78-215ENST00000538176 KATNAL1Q9BW62 490 aa24.73■■□□□ 1.55
CCDC78-215ENST00000538176 PSTPIP2Q9H939 334 aa24.73■■□□□ 1.55
CCDC78-215ENST00000538176 PPP4R2Q9NY27 417 aa24.73■■□□□ 1.55
CCDC78-215ENST00000538176 FRMPD4Q14CM0 1322 aa24.72■■□□□ 1.55
CCDC78-215ENST00000538176 CCDC196A0A1B0GTZ2 297 aa24.72■■□□□ 1.55
CCDC78-215ENST00000538176 PPFIA4O75335 1185 aa24.72■■□□□ 1.55
CCDC78-215ENST00000538176 RXRAP19793 462 aa24.72■■□□□ 1.55
CCDC78-215ENST00000538176 PSMA5P28066 241 aa24.72■■□□□ 1.55
CCDC78-215ENST00000538176 PSRC1Q6PGN9 363 aaPredicted RBP24.72■■□□□ 1.55
CCDC78-215ENST00000538176 RPUSD2Q8IZ73 545 aaKnown RBP24.72■■□□□ 1.55
CCDC78-215ENST00000538176 DEFB123Q8N688 67 aa24.72■■□□□ 1.55
CCDC78-215ENST00000538176 PPP1R12CQ9BZL4 782 aa24.72■■□□□ 1.55
CCDC78-215ENST00000538176 TRPV6Q9H1D0 765 aa24.72■■□□□ 1.55
CCDC78-215ENST00000538176 SZT2Q5T011 3432 aa24.71■■□□□ 1.55
CCDC78-215ENST00000538176 SCN10AQ9Y5Y9 1956 aa24.71■■□□□ 1.55
CCDC78-215ENST00000538176 RGS20O76081 388 aa24.71■■□□□ 1.55
CCDC78-215ENST00000538176 COL9A3Q14050 684 aaPredicted RBP24.71■■□□□ 1.55
CCDC78-215ENST00000538176 RTN1Q16799 776 aa24.71■■□□□ 1.55
CCDC78-215ENST00000538176 SESTD1Q86VW0 696 aa24.71■■□□□ 1.55
CCDC78-215ENST00000538176 FBXL16Q8N461 479 aa24.71■■□□□ 1.55
CCDC78-215ENST00000538176 hCG_1984214I3L0E3 225 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 MEIS2O14770 477 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 CSF2RAP15509 400 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 ICAM3P32942 547 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 EPHB4P54760 987 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 FAM47CQ5HY64 1035 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 CELF3Q5SZQ8 465 aaKnown RBP24.7■■□□□ 1.54
CCDC78-215ENST00000538176 MYSM1Q5VVJ2 828 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 BLOC1S2Q6QNY1 142 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 CMTR1Q8N1G2 835 aaKnown RBP24.7■■□□□ 1.54
CCDC78-215ENST00000538176 CCDC82Q8N4S0 544 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 ZNF713Q8N859 430 aaPredicted RBP24.7■■□□□ 1.54
CCDC78-215ENST00000538176 NOC4LQ9BVI4 516 aaKnown RBP24.7■■□□□ 1.54
CCDC78-215ENST00000538176 MTIF3Q9H2K0 278 aaKnown RBP24.7■■□□□ 1.54
CCDC78-215ENST00000538176 IL23AQ9NPF7 189 aa24.7■■□□□ 1.54
CCDC78-215ENST00000538176 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.69■■□□□ 1.54
CCDC78-215ENST00000538176 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.69■■□□□ 1.54
CCDC78-215ENST00000538176 CYP2C18P33260 490 aa24.69■■□□□ 1.54
CCDC78-215ENST00000538176 NEDD9Q14511 834 aa24.69■■□□□ 1.54
CCDC78-215ENST00000538176 PCNX4Q63HM2 1172 aa24.69■■□□□ 1.54
CCDC78-215ENST00000538176 USP17L6PQ6QN14 398 aa24.69■■□□□ 1.54
CCDC78-215ENST00000538176 INPP4AQ96PE3 977 aaPredicted RBP24.69■■□□□ 1.54
CCDC78-215ENST00000538176 GLT8D2Q9H1C3 349 aa24.69■■□□□ 1.54
CCDC78-215ENST00000538176 MLXIPQ9HAP2 919 aa24.69■■□□□ 1.54
CCDC78-215ENST00000538176 CENPBP07199 599 aaPredicted RBP24.68■■□□□ 1.54
CCDC78-215ENST00000538176 HOXD8P13378 290 aaPredicted RBP24.68■■□□□ 1.54
CCDC78-215ENST00000538176 NLRX1Q86UT6 975 aa24.68■■□□□ 1.54
CCDC78-215ENST00000538176 IL31RAQ8NI17 732 aa24.68■■□□□ 1.54
CCDC78-215ENST00000538176 JAKMIP1Q96N16 626 aaKnown RBP24.68■■□□□ 1.54
CCDC78-215ENST00000538176 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.68■■□□□ 1.54
CCDC78-215ENST00000538176 EHMT1Q9H9B1 1298 aa24.68■■□□□ 1.54
CCDC78-215ENST00000538176 TRMT13Q9NUP7 481 aaKnown RBP24.68■■□□□ 1.54
CCDC78-215ENST00000538176 BRPF3Q9ULD4 1205 aa24.68■■□□□ 1.54
CCDC78-215ENST00000538176 NOD1Q9Y239 953 aa24.68■■□□□ 1.54
CCDC78-215ENST00000538176 SNX14Q9Y5W7 946 aa24.68■■□□□ 1.54
CCDC78-215ENST00000538176 KLF18A0A0U1RQI7 1052 aa24.67■■□□□ 1.54
CCDC78-215ENST00000538176 PITPNM1O00562 1244 aa24.67■■□□□ 1.54
CCDC78-215ENST00000538176 FIBPO43427 364 aa24.67■■□□□ 1.54
CCDC78-215ENST00000538176 GGPS1O95749 300 aa24.67■■□□□ 1.54
CCDC78-215ENST00000538176 PFKMP08237 780 aa24.67■■□□□ 1.54
CCDC78-215ENST00000538176 MRPS9P82933 396 aaKnown RBP24.67■■□□□ 1.54
CCDC78-215ENST00000538176 BFSP2Q13515 415 aa24.67■■□□□ 1.54
CCDC78-215ENST00000538176 TMEM240Q5SV17 173 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms