RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 CCDC82Q8N4S0 544 aa14.4□□□□□ -0.1
PTPN6-209ENST00000537533 OR6J1Q8NGC5 347 aa14.4□□□□□ -0.1
PTPN6-209ENST00000537533 COPS5Q92905 334 aa14.4□□□□□ -0.1
PTPN6-209ENST00000537533 BRF1Q92994 677 aa14.4□□□□□ -0.1
PTPN6-209ENST00000537533 POLR3EQ9NVU0 708 aa14.4□□□□□ -0.1
PTPN6-209ENST00000537533 DDX41Q9UJV9 622 aaKnown RBP14.4□□□□□ -0.1
PTPN6-209ENST00000537533 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 TRIM43BA6NCK2 446 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 KIAA0355O15063 1070 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 PQBP1O60828 265 aaKnown RBP14.39□□□□□ -0.11
PTPN6-209ENST00000537533 CDC27P30260 824 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 APOBRQ0VD83 1088 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 BRDTQ58F21 947 aaPredicted RBP14.39□□□□□ -0.11
PTPN6-209ENST00000537533 KCNV1Q6PIU1 500 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 SH3RF1Q7Z6J0 888 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 IL31RAQ8NI17 732 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 CUL5Q93034 780 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 EMID1Q96A84 441 aaPredicted RBP14.39□□□□□ -0.11
PTPN6-209ENST00000537533 TRIM43Q96BQ3 446 aaPredicted RBP14.39□□□□□ -0.11
PTPN6-209ENST00000537533 PSTPIP2Q9H939 334 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 GRIN2DO15399 1336 aa14.39□□□□□ -0.11
PTPN6-209ENST00000537533 SZT2Q5T011 3432 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 DCDC2CA8MYV0 355 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 hCG_1984214I3L0E3 225 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 KPNA6O60684 536 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 STAM2O75886 525 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 GH1P01241 217 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 MYCLP12524 364 aaPredicted RBP14.38□□□□□ -0.11
PTPN6-209ENST00000537533 CCND2P30279 289 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 METAP2P50579 478 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTPN6-209ENST00000537533 FXR1P51114 621 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTPN6-209ENST00000537533 PURAQ00577 322 aaKnown RBP14.38□□□□□ -0.11
PTPN6-209ENST00000537533 MDM2Q00987 491 aaPredicted RBP14.38□□□□□ -0.11
PTPN6-209ENST00000537533 ARHGAP1Q07960 439 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 ITGA7Q13683 1181 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 LY6KQ17RY6 165 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 USP17L6PQ6QN14 398 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 FAM126BQ8IXS8 530 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 ZNF713Q8N859 430 aaPredicted RBP14.38□□□□□ -0.11
PTPN6-209ENST00000537533 SMARCC2Q8TAQ2 1214 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 VTI1AQ96AJ9 217 aa14.38□□□□□ -0.11
PTPN6-209ENST00000537533 PRDM5Q9NQX1 630 aaPredicted RBP14.38□□□□□ -0.11
PTPN6-209ENST00000537533 EIF5BO60841 1220 aaKnown RBP14.37□□□□□ -0.11
PTPN6-209ENST00000537533 CD4P01730 458 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 TGFB3P10600 412 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 ADD1P35611 737 aaKnown RBP14.37□□□□□ -0.11
PTPN6-209ENST00000537533 MRPS9P82933 396 aaKnown RBP14.37□□□□□ -0.11
PTPN6-209ENST00000537533 WWC2Q6AWC2 1192 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 PPP1R18Q6NYC8 613 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 XRRA1Q6P2D8 792 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 IL17RAQ96F46 866 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
PTPN6-209ENST00000537533 MTG1Q9BT17 334 aaPredicted RBP14.37□□□□□ -0.11
PTPN6-209ENST00000537533 UBE2OQ9C0C9 1292 aaKnown RBP14.37□□□□□ -0.11
PTPN6-209ENST00000537533 TMEM39AQ9NV64 488 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 PCDH10Q9P2E7 1040 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 TBX21Q9UL17 535 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 CYP46A1Q9Y6A2 500 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 MRVI1Q9Y6F6 885 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
PTPN6-209ENST00000537533 DOCK5Q9H7D0 1870 aa14.37□□□□□ -0.11
PTPN6-209ENST00000537533 TLR3O15455 904 aaKnown RBP14.36□□□□□ -0.11
PTPN6-209ENST00000537533 MMP3P08254 477 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 MYL3P08590 195 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 ITGB8P26012 769 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 ICAM3P32942 547 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 ANAPC15P60006 121 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 LAMC2Q13753 1193 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 TOB2Q14106 344 aaPredicted RBP14.36□□□□□ -0.11
PTPN6-209ENST00000537533 PCNX4Q63HM2 1172 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 TYW1BQ6NUM6 668 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 TDHQ8IZJ6 230 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 GPKOWQ92917 476 aaPredicted RBP eCLIP14.36□□□□□ -0.11
PTPN6-209ENST00000537533 INPP4AQ96PE3 977 aaPredicted RBP14.36□□□□□ -0.11
PTPN6-209ENST00000537533 BARHL2Q9NY43 387 aa14.36□□□□□ -0.11
PTPN6-209ENST00000537533 STXBP3O00186 592 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 PRPF3O43395 683 aaKnown RBP14.35□□□□□ -0.11
PTPN6-209ENST00000537533 HOXD8P13378 290 aaPredicted RBP14.35□□□□□ -0.11
PTPN6-209ENST00000537533 PDIA3P30101 505 aaKnown RBP14.35□□□□□ -0.11
PTPN6-209ENST00000537533 PSMC6P62333 389 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 SP2Q02086 613 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 NTRK3Q16288 839 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 PFKFB3Q16875 520 aaPredicted RBP14.35□□□□□ -0.11
PTPN6-209ENST00000537533 GNPTABQ3T906 1256 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 MYSM1Q5VVJ2 828 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 PPTC7Q8NI37 304 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 AFG1LQ8WV93 481 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 BADQ92934 168 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 RIC8AQ9NPQ8 531 aa14.35□□□□□ -0.11
PTPN6-209ENST00000537533 NAP1L2Q9ULW6 460 aaPredicted RBP14.35□□□□□ -0.11
PTPN6-209ENST00000537533 SPATA31C2B4DYI2 1134 aa14.34□□□□□ -0.11
PTPN6-209ENST00000537533 SLC34A2O95436 690 aa14.34□□□□□ -0.11
PTPN6-209ENST00000537533 TIMP1P01033 207 aa14.34□□□□□ -0.11
PTPN6-209ENST00000537533 RAG1P15918 1043 aa14.34□□□□□ -0.11
PTPN6-209ENST00000537533 UBA1P22314 1058 aaKnown RBP14.34□□□□□ -0.11
PTPN6-209ENST00000537533 NAPAP54920 295 aa14.34□□□□□ -0.11
PTPN6-209ENST00000537533 PTPN11Q06124 597 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-209ENST00000537533 LRIT3Q3SXY7 679 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms