RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 ADCK5Q3MIX3 580 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 FAM109BQ6ICB4 259 aaPredicted RBP17.29■□□□□ 0.36
UBC-204ENST00000536661 SGMS1Q86VZ5 419 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 FCHSD1Q86WN1 690 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 CMTR1Q8N1G2 835 aaKnown RBP17.29■□□□□ 0.36
UBC-204ENST00000536661 SRBD1Q8N5C6 995 aaKnown RBP17.29■□□□□ 0.36
UBC-204ENST00000536661 PPP1R13LQ8WUF5 828 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 LZTS2Q9BRK4 669 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 ALDH8A1Q9H2A2 487 aaPredicted RBP17.29■□□□□ 0.36
UBC-204ENST00000536661 HIPK3Q9H422 1215 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 DDX41Q9UJV9 622 aaKnown RBP17.29■□□□□ 0.36
UBC-204ENST00000536661 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 MRVI1Q9Y6F6 885 aa17.29■□□□□ 0.36
UBC-204ENST00000536661 KPNA6O60684 536 aa17.28■□□□□ 0.36
UBC-204ENST00000536661 RGS20O76081 388 aa17.28■□□□□ 0.36
UBC-204ENST00000536661 MMP3P08254 477 aa17.28■□□□□ 0.36
UBC-204ENST00000536661 CSF2RAP15509 400 aa17.28■□□□□ 0.36
UBC-204ENST00000536661 PPIGQ13427 754 aaKnown RBP eCLIP17.28■□□□□ 0.36
UBC-204ENST00000536661 MICU3Q86XE3 530 aa17.28■□□□□ 0.36
UBC-204ENST00000536661 TMEM199Q8N511 208 aa17.28■□□□□ 0.36
UBC-204ENST00000536661 GUCD1Q96NT3 240 aa17.28■□□□□ 0.36
UBC-204ENST00000536661 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.28■□□□□ 0.36
UBC-204ENST00000536661 NOC4LQ9BVI4 516 aaKnown RBP17.28■□□□□ 0.36
UBC-204ENST00000536661 TRMT13Q9NUP7 481 aaKnown RBP17.28■□□□□ 0.36
UBC-204ENST00000536661 SEC63Q9UGP8 760 aaKnown RBP17.28■□□□□ 0.36
UBC-204ENST00000536661 FRMPD4Q14CM0 1322 aa17.27■□□□□ 0.36
UBC-204ENST00000536661 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.36
UBC-204ENST00000536661 NBPF20Q3BBV1 942 aa17.27■□□□□ 0.36
UBC-204ENST00000536661 TSGA10IPQ3SY00 556 aa17.27■□□□□ 0.36
UBC-204ENST00000536661 FAM47CQ5HY64 1035 aa17.27■□□□□ 0.36
UBC-204ENST00000536661 C16orf59Q7L2K0 433 aa17.27■□□□□ 0.36
UBC-204ENST00000536661 VSIG10LQ86VR7 867 aa17.27■□□□□ 0.36
UBC-204ENST00000536661 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
UBC-204ENST00000536661 WNT8AQ9H1J5 351 aa17.27■□□□□ 0.36
UBC-204ENST00000536661 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
UBC-204ENST00000536661 TRIP12Q14669 1992 aaPredicted RBP17.27■□□□□ 0.36
UBC-204ENST00000536661 CDH23Q9H251 3354 aa17.27■□□□□ 0.35
UBC-204ENST00000536661 NEFLP07196 543 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 ACRP10323 421 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 CYP2C9P11712 490 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 CCND2P30279 289 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 TMTC3Q6ZXV5 915 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
UBC-204ENST00000536661 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 EMID1Q96A84 441 aaPredicted RBP17.26■□□□□ 0.35
UBC-204ENST00000536661 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 EYSQ5T1H1 3165 aa17.26■□□□□ 0.35
UBC-204ENST00000536661 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
UBC-204ENST00000536661 CCL23P55773 120 aa17.25■□□□□ 0.35
UBC-204ENST00000536661 SMAD3P84022 425 aaKnown RBP17.25■□□□□ 0.35
UBC-204ENST00000536661 KRT32Q14532 448 aa17.25■□□□□ 0.35
UBC-204ENST00000536661 TMEM240Q5SV17 173 aa17.25■□□□□ 0.35
UBC-204ENST00000536661 NFRKBQ6P4R8 1299 aa17.25■□□□□ 0.35
UBC-204ENST00000536661 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
UBC-204ENST00000536661 CCDC82Q8N4S0 544 aa17.25■□□□□ 0.35
UBC-204ENST00000536661 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
UBC-204ENST00000536661 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
UBC-204ENST00000536661 CNTNAP5Q8WYK1 1306 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 MEIS2O14770 477 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 SORBS3O60504 671 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 UBA1P22314 1058 aaKnown RBP17.24■□□□□ 0.35
UBC-204ENST00000536661 CHMP4BP1P59074 171 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 MRPS9P82933 396 aaKnown RBP17.24■□□□□ 0.35
UBC-204ENST00000536661 LAMC2Q13753 1193 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 ZNF697Q5TEC3 545 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 PSRC1Q6PGN9 363 aaPredicted RBP17.24■□□□□ 0.35
UBC-204ENST00000536661 SYNE3Q6ZMZ3 975 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 DHX37Q8IY37 1157 aaKnown RBP17.24■□□□□ 0.35
UBC-204ENST00000536661 SLC17A8Q8NDX2 589 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 SMARCC2Q8TAQ2 1214 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 KAT2BQ92831 832 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 IL23AQ9NPF7 189 aa17.24■□□□□ 0.35
UBC-204ENST00000536661 UNC80Q8N2C7 3258 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 PIK3CDO00329 1044 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 GGPS1O95749 300 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 CPA1P15085 419 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
UBC-204ENST00000536661 HSPA4P34932 840 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 SP2Q02086 613 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
UBC-204ENST00000536661 DGKDQ16760 1214 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 CELF3Q5SZQ8 465 aaKnown RBP17.23■□□□□ 0.35
UBC-204ENST00000536661 MYSM1Q5VVJ2 828 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 KCNV1Q6PIU1 500 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 ZNF365Q70YC5 407 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 PPTC7Q8NI37 304 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 KCNB2Q92953 911 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 CUL5Q93034 780 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 SCLYQ96I15 445 aa17.23■□□□□ 0.35
UBC-204ENST00000536661 TTYH1Q9H313 450 aaPredicted RBP17.23■□□□□ 0.35
UBC-204ENST00000536661 ZBTB43O43298 467 aa17.22■□□□□ 0.35
UBC-204ENST00000536661 ZNF286BP0CG31 522 aa17.22■□□□□ 0.35
UBC-204ENST00000536661 RTN1Q16799 776 aa17.22■□□□□ 0.35
UBC-204ENST00000536661 RASIP1Q5U651 963 aa17.22■□□□□ 0.35
UBC-204ENST00000536661 SESTD1Q86VW0 696 aa17.22■□□□□ 0.35
UBC-204ENST00000536661 INPP4AQ96PE3 977 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms