RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 EIF2AK2P19525 551 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 POU3F3P20264 500 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 GDF6Q6KF10 455 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CNKSR3Q6P9H4 555 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 SESTD1Q86VW0 696 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 ADGRF4Q8IZF3 695 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 SYTL5Q8TDW5 730 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 HLA-CQ95604 372 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 TAAR1Q96RJ0 339 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 ZSCAN10Q96SZ4 725 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 UBAC1Q9BSL1 405 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 ALG1Q9BT22 464 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CHD7Q9P2D1 2997 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 NCOR1O75376 2440 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 MYH6P13533 1939 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 HIP1O00291 1037 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CFBP00751 764 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 BMP1P13497 986 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 PSEN2P49810 448 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 WDR5P61964 334 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 ARHGAP1Q07960 439 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 GRB10Q13322 594 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 IMMTQ16891 758 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 QRICH1Q2TAL8 776 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CCDC62Q6P9F0 684 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 DHX37Q8IY37 1157 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 GTF2IRD1Q9UHL9 959 aa15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 COL4A4P53420 1690 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 PRRC2BQ5JSZ5 2229 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-207ENST00000535958 EPOPA6NHQ4 379 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 SDSP20132 328 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 LAMC2Q13753 1193 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 MFSD10Q14728 455 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 KRT40Q6A162 431 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 B4GALNT3Q6L9W6 998 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CWC27Q6UX04 472 aaKnown RBP15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 FAM122AQ96E09 287 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 AMNQ9BXJ7 453 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 KRT23Q9C075 422 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 MTUS1Q9ULD2 1270 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 KIAA1217Q5T5P2 1943 aa15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 TRIP12Q14669 1992 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-207ENST00000535958 ABHD14A-ACY1A0A1B0GW23 586 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 B4E1Z4 1266 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 EIF3JO75822 258 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 ZNF286BP0CG31 522 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CKBP12277 381 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 MYCLP12524 364 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 IKBKEQ14164 716 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 KIAA0753Q2KHM9 967 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 IFIT1BQ5T764 474 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 PPTC7Q8NI37 304 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 GDPD5Q8WTR4 605 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 TBC1D5Q92609 795 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 EMID1Q96A84 441 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CNNM2Q9H8M5 875 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 PXMP2Q9NR77 195 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 COL20A1Q9P218 1284 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 HDAC6Q9UBN7 1215 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 RAPGEFL1Q9UHV5 662 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 DDX41Q9UJV9 622 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 HCN4Q9Y3Q4 1203 aa15.1■□□□□ 0.01
TNFRSF1A-207ENST00000535958 NR3C2P08235 984 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 DEFB103AP81534 67 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 RBL2Q08999 1139 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 TRAF1Q13077 416 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 PTK7Q13308 1070 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 FAM117BQ6P1L5 589 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 KCNV1Q6PIU1 500 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 KAT2BQ92831 832 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 TGS1Q96RS0 853 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 RAD9AQ99638 391 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 RWDD1Q9H446 243 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 EMSYQ7Z589 1322 aa15.09■□□□□ 0.01
TNFRSF1A-207ENST00000535958 XIRP2A4UGR9 3374 aa15.08■□□□□ 0.01
TNFRSF1A-207ENST00000535958 TET1Q8NFU7 2136 aa15.08■□□□□ 0.01
TNFRSF1A-207ENST00000535958 LCHNA4D1U4 455 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 ARHGEF15O94989 841 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 GJB5O95377 273 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 F2P00734 622 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 CXCL10P02778 98 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 PLA2G5P39877 138 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 TMCO2Q7Z6W1 182 aaPredicted RBP15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 SPATA33Q96N06 139 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 DSCC1Q9BVC3 393 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 JMJD4Q9H9V9 463 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 LMCD1Q9NZU5 365 aa15.08■□□□□ 0
TNFRSF1A-207ENST00000535958 BDP1A6H8Y1 2624 aa15.07■□□□□ 0
TNFRSF1A-207ENST00000535958 SORBS3O60504 671 aa15.07■□□□□ 0
TNFRSF1A-207ENST00000535958 AMHP03971 560 aa15.07■□□□□ 0
TNFRSF1A-207ENST00000535958 TRDNQ13061 729 aa15.07■□□□□ 0
TNFRSF1A-207ENST00000535958 AAMPQ13685 434 aa15.07■□□□□ 0
TNFRSF1A-207ENST00000535958 DHX38Q92620 1227 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-207ENST00000535958 ANKS1AQ92625 1134 aa15.07■□□□□ 0
TNFRSF1A-207ENST00000535958 MAP3K20Q9NYL2 800 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-207ENST00000535958 PTPRSQ13332 1948 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms