RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 RAB11FIP4Q86YS3 637 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 TRIM43Q96BQ3 446 aaPredicted RBP10.92□□□□□ -0.66
CDCA3-204ENST00000535406 TCEANC2Q96MN5 208 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 KIAA1217Q5T5P2 1943 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 GCOM1H8Y6P7 765 aaPredicted RBP10.91□□□□□ -0.66
CDCA3-204ENST00000535406 ARVCFO00192 962 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 ARIH2O95376 493 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 HMGB1P09429 215 aaKnown RBP10.91□□□□□ -0.66
CDCA3-204ENST00000535406 POLR2MP0CAP2 368 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 SMARCA1P28370 1054 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 FAAP100Q0VG06 881 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 TMEM132AQ24JP5 1023 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 BRDTQ58F21 947 aaPredicted RBP10.91□□□□□ -0.66
CDCA3-204ENST00000535406 SEPT14Q6ZU15 432 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 SRBD1Q8N5C6 995 aaKnown RBP10.91□□□□□ -0.66
CDCA3-204ENST00000535406 BADQ92934 168 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 TMEM39AQ9NV64 488 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 POLR3EQ9NVU0 708 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 SZT2Q5T011 3432 aa10.91□□□□□ -0.66
CDCA3-204ENST00000535406 KIAA0355O15063 1070 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 TLR3O15455 904 aaKnown RBP10.9□□□□□ -0.66
CDCA3-204ENST00000535406 EIF3JO75822 258 aaKnown RBP10.9□□□□□ -0.66
CDCA3-204ENST00000535406 NR3C2P08235 984 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 RAG1P15918 1043 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 HSPA4P34932 840 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 CDK7P50613 346 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 FGD1P98174 961 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 EXOSC10Q01780 885 aaKnown RBP10.9□□□□□ -0.66
CDCA3-204ENST00000535406 ITGA7Q13683 1181 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 PGM5Q15124 567 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 APOA5Q6Q788 366 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 TMTC3Q6ZXV5 915 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 FCHSD1Q86WN1 690 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 FAM126BQ8IXS8 530 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 CMTR1Q8N1G2 835 aaKnown RBP10.9□□□□□ -0.66
CDCA3-204ENST00000535406 FANCBQ8NB91 859 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 COPS5Q92905 334 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 JAKMIP1Q96N16 626 aaKnown RBP10.9□□□□□ -0.66
CDCA3-204ENST00000535406 PDCD2LQ9BRP1 358 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 SEZ6LQ9BYH1 1024 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 RBM28Q9NW13 759 aaKnown RBP10.9□□□□□ -0.66
CDCA3-204ENST00000535406 GTF3C3Q9Y5Q9 886 aa10.9□□□□□ -0.66
CDCA3-204ENST00000535406 SOX1O00570 391 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-204ENST00000535406 ZBTB43O43298 467 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 GH1P01241 217 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 MYL3P08590 195 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 MYCLP12524 364 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-204ENST00000535406 ITGB8P26012 769 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 PSMC6P62333 389 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 PURAQ00577 322 aaKnown RBP10.89□□□□□ -0.67
CDCA3-204ENST00000535406 RTN1Q16799 776 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 LY6KQ17RY6 165 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 LRIT3Q3SXY7 679 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 CCDC62Q6P9F0 684 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 CCDC82Q8N4S0 544 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 SLC43A3Q8NBI5 491 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 KCNB2Q92953 911 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 CUL5Q93034 780 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 TBX21Q9UL17 535 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 SNX14Q9Y5W7 946 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 MRVI1Q9Y6F6 885 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 CNTNAP5Q8WYK1 1306 aa10.89□□□□□ -0.67
CDCA3-204ENST00000535406 SCN10AQ9Y5Y9 1956 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 KLF18A0A0U1RQI7 1052 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 A6NJR5 290 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 GOLGA8AA7E2F4 631 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 GOLGA8BA8MQT2 603 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-204ENST00000535406 KPNA6O60684 536 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 CPA1P15085 419 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 CCND2P30279 289 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 FPGSQ05932 587 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 IL31RAQ8NI17 732 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 SMARCC2Q8TAQ2 1214 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 LRCH3Q96II8 777 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 MTG1Q9BT17 334 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-204ENST00000535406 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 NAP1L2Q9ULW6 460 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-204ENST00000535406 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
CDCA3-204ENST00000535406 LAMA2P24043 3122 aaKnown RBP10.88□□□□□ -0.67
CDCA3-204ENST00000535406 hCG_1642624A0A1W2PR95 340 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 EPB41L2O43491 1005 aaKnown RBP10.87□□□□□ -0.67
CDCA3-204ENST00000535406 B4GALT4O60513 344 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 TIMP1P01033 207 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 CD4P01730 458 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 MMP3P08254 477 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 PSMA5P28066 241 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 RCAN1P53805 252 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 ARHGAP1Q07960 439 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 KCNV1Q6PIU1 500 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 USP17L6PQ6QN14 398 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 POTEHQ6S545 545 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 Q6ZUG5 572 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 HEATR3Q7Z4Q2 680 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 VSIG10LQ86VR7 867 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 AFG1LQ8WV93 481 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 EMID1Q96A84 441 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms