RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
SPG11-203ENST00000535302 USP17L1Q7RTZ2 530 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 CCNYQ8ND76 341 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 POLIQ9UNA4 740 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 DDAH1O94760 285 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 YWHAEP62258 255 aaKnown RBP13.75□□□□□ -0.21
SPG11-203ENST00000535302 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 MYRIPQ8NFW9 859 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 SEPT8Q92599 483 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 DNMT1P26358 1616 aaKnown RBP13.74□□□□□ -0.21
SPG11-203ENST00000535302 CACNB3P54284 484 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 KRT33BQ14525 404 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 CFAP43Q8NDM7 1665 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 STMN1P16949 149 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 NR5A1Q13285 461 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 DCAF15Q66K64 600 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 SLC5A4Q9NY91 659 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 FAM26FQ5R3K3 315 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.74□□□□□ -0.21
SPG11-203ENST00000535302 TMEM2Q9UHN6 1383 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 GOLGA8SH3BPF8 625 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 HADHQ16836 314 aaKnown RBP13.74□□□□□ -0.21
SPG11-203ENST00000535302 HAUS1Q96CS2 278 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 RAB17Q9H0T7 212 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 FAF1Q9UNN5 650 aaPredicted RBP13.74□□□□□ -0.21
SPG11-203ENST00000535302 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
SPG11-203ENST00000535302 E2F5Q15329 346 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 SCARA5Q6ZMJ2 495 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 ARHGEF12Q9NZN5 1544 aa13.74□□□□□ -0.21
SPG11-203ENST00000535302 IQCB1Q15051 598 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 XDHP47989 1333 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 S100BP04271 92 aaPredicted RBP13.73□□□□□ -0.21
SPG11-203ENST00000535302 STAG1Q8WVM7 1258 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
SPG11-203ENST00000535302 ZCWPW1Q9H0M4 648 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 HAUS2Q9NVX0 235 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 HESX1Q9UBX0 185 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 GSTA4O15217 222 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 SEC31AO94979 1220 aaKnown RBP13.73□□□□□ -0.21
SPG11-203ENST00000535302 CD2BP2O95400 341 aaKnown RBP13.73□□□□□ -0.21
SPG11-203ENST00000535302 NPR1P16066 1061 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 RBL2Q08999 1139 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 TBCKQ8TEA7 893 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 TSKSQ9UJT2 592 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 HYOU1Q9Y4L1 999 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 ABCC2Q92887 1545 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 RNF40O75150 1001 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 CMA1P23946 247 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 BFSP1Q12934 665 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 SLC9A5Q14940 896 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 AIFM3Q96NN9 605 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 NCAPGQ9BPX3 1015 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 TUBBP07437 444 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 EEF1B2P24534 225 aaKnown RBP13.73□□□□□ -0.21
SPG11-203ENST00000535302 EXOC3L4Q17RC7 722 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 RPS6KC1Q96S38 1066 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 TM6SF1Q9BZW5 370 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 RIC8AQ9NPQ8 531 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 PCDHA4Q9UN74 947 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 SLC4A7Q9Y6M7 1214 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 CYP21A2P08686 494 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
SPG11-203ENST00000535302 KCTD2Q14681 263 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 LRRC8AQ8IWT6 810 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 SDCCAG3Q96C92 435 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 NBPF3Q9H094 633 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 PYCARDQ9ULZ3 195 aa13.73□□□□□ -0.21
SPG11-203ENST00000535302 PHBP35232 272 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 MRPS25P82663 173 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 MTMR3Q13615 1198 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 ACBD5Q5T8D3 534 aaPredicted RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 TRIM58Q8NG06 486 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 NRBP2Q9NSY0 501 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 KDM5AP29375 1690 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 GOLGA8IPA6NC78 632 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 GOLGA8JA6NMD2 632 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 HNRNPCL1O60812 293 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 PPFIA2O75334 1257 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 ACTN1P12814 892 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 ATF2P15336 505 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 FAM133BQ5BKY9 247 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 C11orf57Q6ZUT1 292 aaPredicted RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 ZNF513Q8N8E2 541 aaPredicted RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 A6NJR5 290 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 CD58P19256 250 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 SLCO1A2P46721 670 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 RNASELQ05823 741 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 MTERF2Q49AM1 385 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 FAM160B1Q5W0V3 765 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 ZNF710Q8N1W2 664 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 NLRP7Q8WX94 980 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 CARMIL3Q8ND23 1372 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 SFI1A8K8P3 1242 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 TUBB2AQ13885 445 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 TUBB2BQ9BVA1 445 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms