RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 USP33Q8TEY7 942 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 SH3TC2Q8TF17 1288 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 THAP3Q8WTV1 239 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-216ENST00000534389 BCL7CQ8WUZ0 217 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-216ENST00000534389 ZNF622Q969S3 477 aaKnown RBP eCLIP3.79□□□□□ -1.8
CSDE1-216ENST00000534389 ZNF669Q96BR6 464 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-216ENST00000534389 CCDC140Q96MF4 163 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 SLC26A8Q96RN1 970 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 IER2Q9BTL4 223 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 AP5S1Q9NUS5 200 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-216ENST00000534389 RSPH14Q9UHP6 348 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 EMC9Q9Y3B6 208 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 BACE2Q9Y5Z0 518 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 U3KQE9 123 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 FAM135AQ9P2D6 1515 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 NKTRP30414 1462 aaKnown RBP3.79□□□□□ -1.8
CSDE1-216ENST00000534389 SNAPC4Q5SXM2 1469 aa3.79□□□□□ -1.8
CSDE1-216ENST00000534389 PRDM2Q13029 1718 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 SHROOM2Q13796 1616 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 KIF14Q15058 1648 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 TRBV23OR9-2A0A075B6M9 112 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 TRBV23-1A0A0A0MS06 115 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 A0A1W2PQU0 124 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 SHOXO15266 292 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 MEFVO15553 781 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-216ENST00000534389 MYO1BO43795 1136 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 DIAPH1O60610 1272 aaKnown RBP3.78□□□□□ -1.8
CSDE1-216ENST00000534389 CDC45O75419 566 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 REC8O95072 547 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 MED26O95402 600 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 CPP00450 1065 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 CD8BP10966 210 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 IFNGR1P15260 489 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 PAMP19021 973 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 PPP2R1AP30153 589 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 HOXC12P31275 282 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 CD97P48960 835 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 FAM193AP78312 1265 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 RBM6P78332 1123 aaKnown RBP3.78□□□□□ -1.8
CSDE1-216ENST00000534389 LRP8Q14114 963 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 SYCP1Q15431 976 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 MSMPQ1L6U9 139 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 DNAJC21Q5F1R6 531 aaKnown RBP3.78□□□□□ -1.8
CSDE1-216ENST00000534389 EEF1DP3Q658K8 133 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 USP53Q70EK8 1073 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 SPPL2CQ8IUH8 684 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 PPIL6Q8IXY8 311 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 CCDC146Q8IYE0 955 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 OXR1Q8N573 874 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 LINC00116Q8NCU8 138 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 APPBP2Q92624 585 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 ALPK1Q96QP1 1244 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 NCAPGQ9BPX3 1015 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 SEMA3GQ9NS98 782 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 BTG4Q9NY30 223 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 POLKQ9UBT6 870 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 MSRB2Q9Y3D2 182 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 MRPL42Q9Y6G3 142 aaKnown RBP3.78□□□□□ -1.8
CSDE1-216ENST00000534389 MAGI3Q5TCQ9 1506 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 UGGT2Q9NYU1 1516 aa3.78□□□□□ -1.8
CSDE1-216ENST00000534389 CARMIL1Q5VZK9 1371 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 EFCAB5A4FU69 1503 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 TLDC2A0PJX2 215 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 CCDC189A1A4V9 331 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 ADCY5O95622 1261 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 PTMAP06454 111 aaKnown RBP3.77□□□□□ -1.81
CSDE1-216ENST00000534389 FAM153BP0C7A2 387 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 SRFP11831 508 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 L1CAMP32004 1257 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 CTSKP43235 329 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 GTF2A1P52655 376 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-216ENST00000534389 RARSP54136 660 aaKnown RBP3.77□□□□□ -1.81
CSDE1-216ENST00000534389 SUMO1P63165 101 aaKnown RBP3.77□□□□□ -1.81
CSDE1-216ENST00000534389 LMOD3Q0VAK6 560 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 C2orf27AQ580R0 203 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 ZC3H12BQ5HYM0 836 aaKnown RBP3.77□□□□□ -1.81
CSDE1-216ENST00000534389 HLA-DQA1Q5Y7H0 255 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 ICE2Q659A1 982 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 CYP2R1Q6VVX0 501 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 CEP128Q6ZU80 1094 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 DTX1Q86Y01 620 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 EGFL6Q8IUX8 553 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 SCUBE1Q8IWY4 988 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 KRT222Q8N1A0 295 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 USHBP1Q8N6Y0 703 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 ZBTB38Q8NAP3 1195 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-216ENST00000534389 KIF1BPQ96EK5 621 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 CARD11Q9BXL7 1154 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 TSPYL1Q9H0U9 437 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 NKX2-4Q9H2Z4 354 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 TSPY26PQ9H489 355 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 RC3H2Q9HBD1 1191 aaKnown RBP3.77□□□□□ -1.81
CSDE1-216ENST00000534389 PRDM7Q9NQW5 492 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 CYP26B1Q9NR63 512 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 FANCLQ9NW38 375 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 LMCD1Q9NZU5 365 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 CLEC1BQ9P126 229 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 SUSD2Q9UGT4 822 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms