RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 PAK2Q13177 524 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 RC3H1Q5TC82 1133 aaKnown RBP18.88■□□□□ 0.61
PHRF1-206ENST00000534320 PODNQ7Z5L7 613 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 VPS72Q15906 364 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 MAK16Q9BXY0 300 aaKnown RBP18.88■□□□□ 0.61
PHRF1-206ENST00000534320 AMFRQ9UKV5 643 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 AGTPBP1Q9UPW5 1226 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 BUB1O43683 1085 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 GAP43P17677 238 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 ABCB4P21439 1286 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 BRD3Q15059 726 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 ARMCX5Q6P1M9 558 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 RTKN2Q8IZC4 609 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 CEP95Q96GE4 821 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 THAP9Q9H5L6 903 aa18.88■□□□□ 0.61
PHRF1-206ENST00000534320 SUDS3Q9H7L9 328 aaPredicted RBP18.88■□□□□ 0.61
PHRF1-206ENST00000534320 SH3BGRP55822 239 aaPredicted RBP18.87■□□□□ 0.61
PHRF1-206ENST00000534320 SMCR8Q8TEV9 937 aaPredicted RBP18.87■□□□□ 0.61
PHRF1-206ENST00000534320 LRRC45Q96CN5 670 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 LIG4P49917 911 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 CLUL1Q15846 466 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 TTLL6Q8N841 843 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 ANO3Q9BYT9 981 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 PPP1R12CQ9BZL4 782 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 SORBS3O60504 671 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 ARHGAP27Q6ZUM4 889 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 JCADQ9P266 1359 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 H0YCG3 227 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 NTSR2O95665 410 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 ALDH3A1P30838 453 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 GBP1P32455 592 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 ZNF365Q70YC5 407 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 VCX3BQ9H321 246 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 ADGRB2O60241 1585 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 MEIS1O00470 390 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 USP14P54578 494 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 DMP1Q13316 513 aaPredicted RBP18.87■□□□□ 0.61
PHRF1-206ENST00000534320 SEPT2Q15019 361 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 RPUSD2Q8IZ73 545 aaKnown RBP18.87■□□□□ 0.61
PHRF1-206ENST00000534320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.87■□□□□ 0.61
PHRF1-206ENST00000534320 TAF6LQ9Y6J9 622 aa18.87■□□□□ 0.61
PHRF1-206ENST00000534320 MEGF6O75095 1541 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 GOLGA6BA6NDN3 693 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 PSMD2Q13200 908 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 ITPK1Q13572 414 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 SND1Q7KZF4 910 aaKnown RBP eCLIP18.86■□□□□ 0.61
PHRF1-206ENST00000534320 MIGA2Q7L4E1 593 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 DCAF4Q8WV16 495 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 C21orf2O43822 256 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 CD19P15391 556 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 TCP1P17987 556 aaKnown RBP18.86■□□□□ 0.61
PHRF1-206ENST00000534320 CUL4BQ13620 913 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 DCUN1D2Q6PH85 259 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 LINC00116Q8NCU8 138 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 GH2P01242 217 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 PLA2G4BP0C869 781 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 ATP2A2P16615 1042 aaKnown RBP18.86■□□□□ 0.61
PHRF1-206ENST00000534320 CCDC38Q502W7 563 aa18.86■□□□□ 0.61
PHRF1-206ENST00000534320 ZBTB5O15062 677 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 KRT19P08727 400 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 GCKP35557 465 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 GADL1Q6ZQY3 521 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 INTS8Q75QN2 995 aaKnown RBP18.85■□□□□ 0.61
PHRF1-206ENST00000534320 SULF1Q8IWU6 871 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 IGDCC4Q8TDY8 1250 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 NACC1Q96RE7 527 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 BPIFA3Q9BQP9 254 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 USTQ9Y2C2 406 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 FAM170AA1A519 330 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 H2AFZP0C0S5 128 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 H2AFVQ71UI9 128 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 SLC35F6Q8N357 371 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 KCNK3O14649 394 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 ANKRD13CQ8N6S4 541 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 CCDC127Q96BQ5 260 aa18.85■□□□□ 0.61
PHRF1-206ENST00000534320 GOLGA6CA6NDK9 693 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 GOLGA6DP0CG33 693 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 HOXA7P31268 230 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-206ENST00000534320 FAM160B2Q86V87 743 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 DCPSQ96C86 337 aaKnown RBP18.84■□□□□ 0.61
PHRF1-206ENST00000534320 TRIM6Q9C030 488 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-206ENST00000534320 KCNK9Q9NPC2 374 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■■■■ 34.4
PHRF1-206ENST00000534320 GOLGA6AQ9NYA3 693 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 GUCY1A2P33402 732 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 TCP11X2Q5H9J9 407 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 SH2D4BQ5SQS7 431 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 C12orf60Q5U649 245 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 SP8Q8IXZ3 490 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 EMILIN3Q9NT22 766 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 CDC23Q9UJX2 597 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 GDAQ9Y2T3 454 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 HOXA13P31271 388 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-206ENST00000534320 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 EAPPQ56P03 285 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-206ENST00000534320 BARGINQ6ZT62 677 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 FAM114A2Q9NRY5 505 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 ECE2O60344 883 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 CIB2O75838 187 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms