RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 DRC1Q96MC2 740 aa6.11□□□□□ -1.43
ATPAF1-211ENST00000534216 PHF20Q9BVI0 1012 aa6.11□□□□□ -1.43
ATPAF1-211ENST00000534216 GPR27Q9NS67 375 aa6.11□□□□□ -1.43
ATPAF1-211ENST00000534216 CNOT6Q9ULM6 557 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-211ENST00000534216 SIT1Q9Y3P8 196 aa6.11□□□□□ -1.43
ATPAF1-211ENST00000534216 IRAK3Q9Y616 596 aa6.11□□□□□ -1.43
ATPAF1-211ENST00000534216 X6R8D5 127 aa6.11□□□□□ -1.43
ATPAF1-211ENST00000534216 KDM2BQ8NHM5 1336 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 H7BY64 318 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 FAM153BP0C7A2 387 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 SLC9A5Q14940 896 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 C1QL4Q86Z23 238 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 DCP2Q8IU60 420 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 RIOX2Q8IUF8 465 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 SCUBE1Q8IWY4 988 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 LRRC56Q8IYG6 542 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 DCAF4Q8WV16 495 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 CHAMP1Q96JM3 812 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
ATPAF1-211ENST00000534216 BLACEA4D250 179 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 BUB1BO60566 1050 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 MSCO60682 206 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 ASGR2P07307 311 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 IGFBP6P24592 240 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 SLC6A11P48066 632 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 TARBP2Q15633 366 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 FOXB2Q5VYV0 432 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 KCNT2Q6UVM3 1135 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 UBXN4Q92575 508 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 ALG3Q92685 438 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 DNAJC7Q99615 494 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 CDC6Q99741 560 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 AP5M1Q9H0R1 490 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 OSBPL2Q9H1P3 480 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 CDIP1Q9H305 208 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 BCAS3Q9H6U6 928 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 CLDND1Q9NY35 253 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 KCTD3Q9Y597 815 aa6.09□□□□□ -1.43
ATPAF1-211ENST00000534216 SGSM2O43147 1006 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 PFKLP17858 780 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 PI3P19957 117 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 LONRF2Q1L5Z9 754 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 ZNF385BQ569K4 471 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 FAM209AQ5JX71 171 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 CIAPIN1Q6FI81 312 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 STYK1Q6J9G0 422 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 TMEFF1Q8IYR6 380 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 SEC14L1Q92503 715 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 RNF38Q9H0F5 515 aa6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 EPB41L4AQ9HCS5 686 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 COA3Q9Y2R0 106 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-211ENST00000534216 TRBV23-1A0A0A0MS06 115 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 RFXAPO00287 272 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 NUAK1O60285 661 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 NCAM1P13591 858 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 ATF2P15336 505 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 PMLP29590 882 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 LBX2Q6XYB7 198 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 FAM129CQ86XR2 697 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 ZSCAN18Q8TBC5 510 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 PANK1Q8TE04 598 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 EXOC2Q96KP1 924 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 ZFYVE21Q9BQ24 234 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 IRF2BPLQ9H1B7 796 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 ASXL2Q76L83 1435 aa6.07□□□□□ -1.44
ATPAF1-211ENST00000534216 LIMS1P48059 325 aa6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 GPR85P60893 370 aa6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 BMS1Q14692 1282 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 DPH6Q7L8W6 267 aa6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 JMYQ8N9B5 988 aa6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 CPA5Q8WXQ8 436 aa6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 IPO9Q96P70 1041 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 DHRS4Q9BTZ2 278 aa6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 EPB41L1Q9H4G0 881 aa6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 PPARGC1AQ9UBK2 798 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 PALD1Q9ULE6 856 aa6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 CDK11AQ9UQ88 783 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-211ENST00000534216 DGKIO75912 1065 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 C6orf222P0C671 652 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 MC3RP41968 323 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 CHRNA2Q15822 529 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 NFE2L2Q16236 605 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 KIZQ2M2Z5 673 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 ZC3H12BQ5HYM0 836 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 CNKSR3Q6P9H4 555 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 LCNL1Q6ZST4 164 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 MILR1Q7Z6M3 343 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 B3GNT8Q7Z7M8 397 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 AMIGO3Q86WK7 504 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 IFNL3Q8IZI9 196 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 KISS1RQ969F8 398 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 DACT3Q96B18 629 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 JAM3Q9BX67 310 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 LNPKQ9C0E8 428 aa6.05□□□□□ -1.44
ATPAF1-211ENST00000534216 MRPS23Q9Y3D9 190 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms