RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 TBX21Q9UL17 535 aa11.08□□□□□ -0.64
FOXRED1-216ENST00000533839 NAP1L2Q9ULW6 460 aaPredicted RBP11.08□□□□□ -0.64
FOXRED1-216ENST00000533839 TAF6LQ9Y6J9 622 aa11.08□□□□□ -0.64
FOXRED1-216ENST00000533839 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
FOXRED1-216ENST00000533839 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 SPDYE3A6NKU9 549 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 hCG_1984214I3L0E3 225 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 PIK3CDO00329 1044 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 PPP1R11O60927 126 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 CD4P01730 458 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 FGBP02675 491 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 CHMP4BP1P59074 171 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 BFSP2Q13515 415 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 RTN1Q16799 776 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 NBPF20Q3BBV1 942 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 FAM109BQ6ICB4 259 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 MICU3Q86XE3 530 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 CCDC82Q8N4S0 544 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 SRBD1Q8N5C6 995 aaKnown RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 DEFB123Q8N688 67 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 ZNF713Q8N859 430 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 AFG1LQ8WV93 481 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 EMID1Q96A84 441 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 CDHR1Q96JP9 859 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 LRRC2Q9BYS8 371 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 ALDH8A1Q9H2A2 487 aaPredicted RBP11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 COL20A1Q9P218 1284 aa11.07□□□□□ -0.64
FOXRED1-216ENST00000533839 MAFGO15525 162 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 FOSP01100 380 aaPredicted RBP11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 HSPA4P34932 840 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 PSMC6P62333 389 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 SMAD3P84022 425 aaKnown RBP11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 PSRC1Q6PGN9 363 aaPredicted RBP11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 C7orf31Q8N865 590 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 PPTC7Q8NI37 304 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 COPS5Q92905 334 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 SPATA33Q96N06 139 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 PPP1R12CQ9BZL4 782 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 V9GY48 417 aaPredicted RBP11.06□□□□□ -0.64
FOXRED1-216ENST00000533839 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 BRCA2P51587 3418 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 KLF18A0A0U1RQI7 1052 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 GOLGA8AA7E2F4 631 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 GOLGA8BA8MQT2 603 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 NOP56O00567 594 aaKnown RBP11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 OPLAHO14841 1288 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 PARNO95453 639 aaKnown RBP11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 PFKMP08237 780 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 MMP3P08254 477 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 ACTN1P12814 892 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 RFC2P35250 354 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 CELF3Q5SZQ8 465 aaKnown RBP11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 TMEM63BQ5T3F8 832 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 TMTC3Q6ZXV5 915 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 HEATR3Q7Z4Q2 680 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 RASEFQ8IZ41 740 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 CCDC12Q8WUD4 166 aaPredicted RBP11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 KCNB2Q92953 911 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 JAKMIP1Q96N16 626 aaKnown RBP11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 USP26Q9BXU7 913 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
FOXRED1-216ENST00000533839 SPATA31C2B4DYI2 1134 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 FIBPO43427 364 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 B4GALT4O60513 344 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 ARIH2O95376 493 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 GGPS1O95749 300 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 GNAT1P11488 350 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 CSF2RAP15509 400 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 RXRAP19793 462 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 ICAM3P32942 547 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 CYP2C18P33260 490 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 METAP2P50579 478 aaKnown RBP eCLIP11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 NAPAP54920 295 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 ARHGAP1Q07960 439 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 PTGISQ16647 500 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 MYSM1Q5VVJ2 828 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 PCNX4Q63HM2 1172 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 Q6ZUG5 572 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 CMTR1Q8N1G2 835 aaKnown RBP11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 SENP7Q9BQF6 1050 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 NOC4LQ9BVI4 516 aaKnown RBP11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 CYP46A1Q9Y6A2 500 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 LAMA4Q16363 1823 aa11.04□□□□□ -0.64
FOXRED1-216ENST00000533839 GRIN2DO15399 1336 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms