RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 HOXA13P31271 388 aaPredicted RBP25.72■■□□□ 1.71
BEST1-207ENST00000533521 ARHGAP1Q07960 439 aa25.72■■□□□ 1.71
BEST1-207ENST00000533521 SHHQ15465 462 aa25.72■■□□□ 1.71
BEST1-207ENST00000533521 ADCK5Q3MIX3 580 aa25.72■■□□□ 1.71
BEST1-207ENST00000533521 NFRKBQ6P4R8 1299 aa25.72■■□□□ 1.71
BEST1-207ENST00000533521 TMTC3Q6ZXV5 915 aa25.72■■□□□ 1.71
BEST1-207ENST00000533521 FBXL16Q8N461 479 aa25.72■■□□□ 1.71
BEST1-207ENST00000533521 PLEKHA8P1O95397 391 aa25.71■■□□□ 1.71
BEST1-207ENST00000533521 CCND2P30279 289 aa25.71■■□□□ 1.71
BEST1-207ENST00000533521 LAMC2Q13753 1193 aa25.71■■□□□ 1.71
BEST1-207ENST00000533521 FAM109BQ6ICB4 259 aaPredicted RBP25.71■■□□□ 1.71
BEST1-207ENST00000533521 XRRA1Q6P2D8 792 aa25.71■■□□□ 1.71
BEST1-207ENST00000533521 COPS5Q92905 334 aa25.71■■□□□ 1.71
BEST1-207ENST00000533521 LRRC2Q9BYS8 371 aa25.71■■□□□ 1.71
BEST1-207ENST00000533521 ALDH8A1Q9H2A2 487 aaPredicted RBP25.71■■□□□ 1.71
BEST1-207ENST00000533521 PPP4R2Q9NY27 417 aa25.71■■□□□ 1.71
BEST1-207ENST00000533521 RGS20O76081 388 aa25.7■■□□□ 1.7
BEST1-207ENST00000533521 MYL3P08590 195 aa25.7■■□□□ 1.7
BEST1-207ENST00000533521 PPIGQ13427 754 aaKnown RBP eCLIP25.7■■□□□ 1.7
BEST1-207ENST00000533521 LY6KQ17RY6 165 aa25.7■■□□□ 1.7
BEST1-207ENST00000533521 TMEM199Q8N511 208 aa25.7■■□□□ 1.7
BEST1-207ENST00000533521 MRVI1Q9Y6F6 885 aa25.7■■□□□ 1.7
BEST1-207ENST00000533521 MYH7BA7E2Y1 1941 aa25.69■■□□□ 1.7
BEST1-207ENST00000533521 CUL5Q93034 780 aa25.69■■□□□ 1.7
BEST1-207ENST00000533521 MEIS2O14770 477 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 ZBTB43O43298 467 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 B4GALT4O60513 344 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 MMP3P08254 477 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 HOXD8P13378 290 aaPredicted RBP25.68■■□□□ 1.7
BEST1-207ENST00000533521 RXRAP19793 462 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 CASTP20810 708 aaKnown RBP25.68■■□□□ 1.7
BEST1-207ENST00000533521 PSMC6P62333 389 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 DGKDQ16760 1214 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 C9orf50Q5SZB4 431 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 FCHSD1Q86WN1 690 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 MICU3Q86XE3 530 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 PPTC7Q8NI37 304 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 AFG1LQ8WV93 481 aa25.68■■□□□ 1.7
BEST1-207ENST00000533521 MYCLP12524 364 aaPredicted RBP25.67■■□□□ 1.7
BEST1-207ENST00000533521 ICAM3P32942 547 aa25.67■■□□□ 1.7
BEST1-207ENST00000533521 EPHB4P54760 987 aa25.67■■□□□ 1.7
BEST1-207ENST00000533521 SESTD1Q86VW0 696 aa25.67■■□□□ 1.7
BEST1-207ENST00000533521 IL31RAQ8NI17 732 aa25.67■■□□□ 1.7
BEST1-207ENST00000533521 INPP4AQ96PE3 977 aaPredicted RBP25.67■■□□□ 1.7
BEST1-207ENST00000533521 HIPK3Q9H422 1215 aa25.67■■□□□ 1.7
BEST1-207ENST00000533521 PPFIA4O75335 1185 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 SMAD3P84022 425 aaKnown RBP25.66■■□□□ 1.7
BEST1-207ENST00000533521 FUT2Q10981 343 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 NBPF20Q3BBV1 942 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 GNPTABQ3T906 1256 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 DHX37Q8IY37 1157 aaKnown RBP25.66■■□□□ 1.7
BEST1-207ENST00000533521 SMARCC2Q8TAQ2 1214 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 PIBF1Q8WXW3 757 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 NOC4LQ9BVI4 516 aaKnown RBP25.66■■□□□ 1.7
BEST1-207ENST00000533521 TRPV6Q9H1D0 765 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 PSTPIP2Q9H939 334 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 BRPF3Q9ULD4 1205 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 SNX14Q9Y5W7 946 aa25.66■■□□□ 1.7
BEST1-207ENST00000533521 hCG_1984214I3L0E3 225 aa25.65■■□□□ 1.7
BEST1-207ENST00000533521 RTN1Q16799 776 aa25.65■■□□□ 1.7
BEST1-207ENST00000533521 CELF3Q5SZQ8 465 aaKnown RBP25.65■■□□□ 1.7
BEST1-207ENST00000533521 MYSM1Q5VVJ2 828 aa25.65■■□□□ 1.7
BEST1-207ENST00000533521 PCNX4Q63HM2 1172 aa25.65■■□□□ 1.7
BEST1-207ENST00000533521 ZNF713Q8N859 430 aaPredicted RBP25.65■■□□□ 1.7
BEST1-207ENST00000533521 AGXT2Q9BYV1 514 aa25.65■■□□□ 1.7
BEST1-207ENST00000533521 LAMA2P24043 3122 aaKnown RBP25.65■■□□□ 1.7
BEST1-207ENST00000533521 CCDC196A0A1B0GTZ2 297 aa25.64■■□□□ 1.7
BEST1-207ENST00000533521 PSMA5P28066 241 aa25.64■■□□□ 1.7
BEST1-207ENST00000533521 MRPS9P82933 396 aaKnown RBP25.64■■□□□ 1.7
BEST1-207ENST00000533521 BLOC1S2Q6QNY1 142 aa25.64■■□□□ 1.7
BEST1-207ENST00000533521 CMTR1Q8N1G2 835 aaKnown RBP25.64■■□□□ 1.7
BEST1-207ENST00000533521 KATNAL1Q9BW62 490 aa25.64■■□□□ 1.7
BEST1-207ENST00000533521 CNTNAP5Q8WYK1 1306 aa25.63■■□□□ 1.69
BEST1-207ENST00000533521 RASIP1Q5U651 963 aa25.63■■□□□ 1.69
BEST1-207ENST00000533521 PPP1R18Q6NYC8 613 aa25.63■■□□□ 1.69
BEST1-207ENST00000533521 PSRC1Q6PGN9 363 aaPredicted RBP25.63■■□□□ 1.69
BEST1-207ENST00000533521 USP17L6PQ6QN14 398 aa25.63■■□□□ 1.69
BEST1-207ENST00000533521 RNPC3Q96LT9 517 aaKnown RBP25.63■■□□□ 1.69
BEST1-207ENST00000533521 TCEANC2Q96MN5 208 aa25.63■■□□□ 1.69
BEST1-207ENST00000533521 JAKMIP1Q96N16 626 aaKnown RBP25.63■■□□□ 1.69
BEST1-207ENST00000533521 IL23AQ9NPF7 189 aa25.63■■□□□ 1.69
BEST1-207ENST00000533521 NID2Q14112 1375 aa25.63■■□□□ 1.69
BEST1-207ENST00000533521 KLF18A0A0U1RQI7 1052 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 SPATA31C2B4DYI2 1134 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 FIBPO43427 364 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 F2P00734 622 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 CSF2RAP15509 400 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 CYP2C18P33260 490 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 TMEM240Q5SV17 173 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 C16orf59Q7L2K0 433 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 DEFB123Q8N688 67 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 KAT2BQ92831 832 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 SENP7Q9BQF6 1050 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 PPP1R12CQ9BZL4 782 aa25.62■■□□□ 1.69
BEST1-207ENST00000533521 FAM217BQ9NTX9 383 aaPredicted RBP25.62■■□□□ 1.69
BEST1-207ENST00000533521 HAS3O00219 553 aa25.61■■□□□ 1.69
BEST1-207ENST00000533521 PITPNM1O00562 1244 aa25.61■■□□□ 1.69
BEST1-207ENST00000533521 GGPS1O95749 300 aa25.61■■□□□ 1.69
BEST1-207ENST00000533521 UBA1P22314 1058 aaKnown RBP25.61■■□□□ 1.69
BEST1-207ENST00000533521 RPS6KB1P23443 525 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms