RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 REXO1Q8N1G1 1221 aaKnown RBP24.01■■□□□ 1.43
VPS51-211ENST00000533487 PCDHA6Q9UN73 950 aa24.01■■□□□ 1.43
VPS51-211ENST00000533487 PCDHA8Q9Y5H6 950 aa24.01■■□□□ 1.43
VPS51-211ENST00000533487 ADAMTS4O75173 837 aa24■■□□□ 1.43
VPS51-211ENST00000533487 LARGE1O95461 756 aa24■■□□□ 1.43
VPS51-211ENST00000533487 LRRC41Q15345 812 aa24■■□□□ 1.43
VPS51-211ENST00000533487 NECAB1Q8N987 351 aa24■■□□□ 1.43
VPS51-211ENST00000533487 NSUN7Q8NE18 718 aaKnown RBP24■■□□□ 1.43
VPS51-211ENST00000533487 CDHR1Q96JP9 859 aa24■■□□□ 1.43
VPS51-211ENST00000533487 HTATIP2Q9BUP3 242 aa24■■□□□ 1.43
VPS51-211ENST00000533487 AP5M1Q9H0R1 490 aa24■■□□□ 1.43
VPS51-211ENST00000533487 ORC3Q9UBD5 711 aaPredicted RBP24■■□□□ 1.43
VPS51-211ENST00000533487 SYNRGQ9UMZ2 1314 aa24■■□□□ 1.43
VPS51-211ENST00000533487 MOXD2PA6NHM9 499 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 MAFGO15525 162 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 ZEB2O60315 1214 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 CTDNEP1O95476 244 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 MYCLP12524 364 aaPredicted RBP23.99■■□□□ 1.43
VPS51-211ENST00000533487 SMPD1P17405 629 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 HMGN5P82970 282 aaKnown RBP23.99■■□□□ 1.43
VPS51-211ENST00000533487 MLLT1Q03111 559 aaPredicted RBP23.99■■□□□ 1.43
VPS51-211ENST00000533487 UBE2SQ16763 222 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 BRDTQ58F21 947 aaPredicted RBP23.99■■□□□ 1.43
VPS51-211ENST00000533487 CCDC62Q6P9F0 684 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 DAGLBQ8NCG7 672 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 KLHDC9Q8NEP7 349 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 INPP4AQ96PE3 977 aaPredicted RBP23.99■■□□□ 1.43
VPS51-211ENST00000533487 PDGFCQ9NRA1 345 aa23.99■■□□□ 1.43
VPS51-211ENST00000533487 TXNP10599 105 aaKnown RBP23.98■■□□□ 1.43
VPS51-211ENST00000533487 COL6A1P12109 1028 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 ICAM3P32942 547 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 MNX1P50219 401 aaPredicted RBP23.98■■□□□ 1.43
VPS51-211ENST00000533487 NLRP5P59047 1200 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 TLK2Q86UE8 772 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 NLRX1Q86UT6 975 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 ANO3Q9BYT9 981 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 C11orf49Q9H6J7 331 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 VPS54Q9P1Q0 977 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 PCDHA4Q9UN74 947 aa23.98■■□□□ 1.43
VPS51-211ENST00000533487 SREBF1P36956 1147 aa23.97■■□□□ 1.43
VPS51-211ENST00000533487 ANO1Q5XXA6 986 aa23.97■■□□□ 1.43
VPS51-211ENST00000533487 SEPT14Q6ZU15 432 aa23.97■■□□□ 1.43
VPS51-211ENST00000533487 GPRASP2Q96D09 838 aa23.97■■□□□ 1.43
VPS51-211ENST00000533487 PAWRQ96IZ0 340 aaKnown RBP23.97■■□□□ 1.43
VPS51-211ENST00000533487 PHF24Q9UPV7 400 aa23.97■■□□□ 1.43
VPS51-211ENST00000533487 MRVI1Q9Y6F6 885 aa23.97■■□□□ 1.43
VPS51-211ENST00000533487 BRCA2P51587 3418 aa23.96■■□□□ 1.43
VPS51-211ENST00000533487 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.96■■□□□ 1.43
VPS51-211ENST00000533487 ADCY6O43306 1168 aa23.96■■□□□ 1.43
VPS51-211ENST00000533487 FIBPO43427 364 aa23.96■■□□□ 1.43
VPS51-211ENST00000533487 PGK1P00558 417 aa23.96■■□□□ 1.43
VPS51-211ENST00000533487 C6orf222P0C671 652 aaPredicted RBP23.96■■□□□ 1.43
VPS51-211ENST00000533487 CPT1AP50416 773 aa23.96■■□□□ 1.43
VPS51-211ENST00000533487 MRPS9P82933 396 aaKnown RBP23.96■■□□□ 1.43
VPS51-211ENST00000533487 IL31RAQ8NI17 732 aa23.96■■□□□ 1.43
VPS51-211ENST00000533487 EMID1Q96A84 441 aaPredicted RBP23.96■■□□□ 1.43
VPS51-211ENST00000533487 SEZ6LQ9BYH1 1024 aa23.96■■□□□ 1.43
VPS51-211ENST00000533487 DDX41Q9UJV9 622 aaKnown RBP23.96■■□□□ 1.43
VPS51-211ENST00000533487 KIF3AQ9Y496 699 aa23.96■■□□□ 1.43
VPS51-211ENST00000533487 DDX49Q9Y6V7 483 aaKnown RBP23.96■■□□□ 1.43
VPS51-211ENST00000533487 KPNA6O60684 536 aa23.95■■□□□ 1.42
VPS51-211ENST00000533487 CABYRO75952 493 aa23.95■■□□□ 1.42
VPS51-211ENST00000533487 GH1P01241 217 aa23.95■■□□□ 1.42
VPS51-211ENST00000533487 GIMAP8Q8ND71 665 aaPredicted RBP23.95■■□□□ 1.42
VPS51-211ENST00000533487 SENP7Q9BQF6 1050 aa23.95■■□□□ 1.42
VPS51-211ENST00000533487 ALG1Q9BT22 464 aa23.95■■□□□ 1.42
VPS51-211ENST00000533487 DYNC1LI2O43237 492 aaPredicted RBP23.94■■□□□ 1.42
VPS51-211ENST00000533487 RGS20O76081 388 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 CYP3A4P08684 503 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 FDPSP14324 419 aaKnown RBP23.94■■□□□ 1.42
VPS51-211ENST00000533487 LAMC2Q13753 1193 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 NEDD9Q14511 834 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 FSCN1Q16658 493 aaKnown RBP23.94■■□□□ 1.42
VPS51-211ENST00000533487 GNASQ5JWF2 1037 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 GJC2Q5T442 439 aaPredicted RBP23.94■■□□□ 1.42
VPS51-211ENST00000533487 CCSAPQ6IQ19 270 aaPredicted RBP23.94■■□□□ 1.42
VPS51-211ENST00000533487 NIPA1Q7RTP0 329 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 CCDC83Q8IWF9 413 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 BLIDQ8IZY5 108 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 PHF20Q9BVI0 1012 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 BRMS1Q9HCU9 246 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 UBIAD1Q9Y5Z9 338 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 MYH7BA7E2Y1 1941 aa23.94■■□□□ 1.42
VPS51-211ENST00000533487 SPATA31C2B4DYI2 1134 aa23.93■■□□□ 1.42
VPS51-211ENST00000533487 PPFIA3O75145 1194 aa23.93■■□□□ 1.42
VPS51-211ENST00000533487 ST3GAL1Q11201 340 aa23.93■■□□□ 1.42
VPS51-211ENST00000533487 TRIM29Q14134 588 aa23.93■■□□□ 1.42
VPS51-211ENST00000533487 C1orf53Q5VUE5 145 aa23.93■■□□□ 1.42
VPS51-211ENST00000533487 OR6J1Q8NGC5 347 aa23.93■■□□□ 1.42
VPS51-211ENST00000533487 POLR3EQ9NVU0 708 aa23.93■■□□□ 1.42
VPS51-211ENST00000533487 ELP1O95163 1332 aa23.92■■□□□ 1.42
VPS51-211ENST00000533487 A6NJR5 290 aa23.92■■□□□ 1.42
VPS51-211ENST00000533487 CTAGE5O15320 804 aa23.92■■□□□ 1.42
VPS51-211ENST00000533487 USP11P51784 963 aa23.92■■□□□ 1.42
VPS51-211ENST00000533487 ARHGAP4P98171 946 aa23.92■■□□□ 1.42
VPS51-211ENST00000533487 JAKMIP3Q5VZ66 844 aa23.92■■□□□ 1.42
VPS51-211ENST00000533487 DIS3LQ8TF46 1054 aaKnown RBP23.92■■□□□ 1.42
VPS51-211ENST00000533487 CRYGNQ8WXF5 182 aa23.92■■□□□ 1.42
VPS51-211ENST00000533487 LENG1Q96BZ8 264 aaPredicted RBP23.92■■□□□ 1.42
VPS51-211ENST00000533487 TMX3Q96JJ7 454 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms