RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 ATP11BQ9Y2G3 1177 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 MYADML2A6NDP7 307 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 H0YGN5 161 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 ADAMTS4O75173 837 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 NR3C2P08235 984 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 COL6A1P12109 1028 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 CCND2P30279 289 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 TTLL4Q14679 1199 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 UBE2SQ16763 222 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 LRRC26Q2I0M4 334 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 TAPT1Q6NXT6 567 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 PHKBQ93100 1093 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 IWS1Q96ST2 819 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 SLC26A6Q9BXS9 759 aa13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 MAP3K20Q9NYL2 800 aaKnown RBP13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 ZMYND8Q9ULU4 1186 aaPredicted RBP13.19□□□□□ -0.3
UBASH3B-208ENST00000533451 A0A1W2PQ45 241 aaPredicted RBP13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 A0A1W2PQY0 241 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 SPDYE3A6NKU9 549 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 ZEB2O60315 1214 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 EDNRBP24530 442 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 PDIA3P30101 505 aaKnown RBP13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 ADCY7P51828 1080 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 ACLYP53396 1101 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 GJA9P57773 515 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 RTP1P59025 263 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 CHMP4BP1P59074 171 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 PGM5Q15124 567 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 KCNA10Q16322 511 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 DUSP28Q4G0W2 176 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 TMEM63BQ5T3F8 832 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 STARD7Q9NQZ5 370 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 PRKAG2Q9UGJ0 569 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 PHF24Q9UPV7 400 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 MRVI1Q9Y6F6 885 aa13.18□□□□□ -0.3
UBASH3B-208ENST00000533451 MKI67P46013 3256 aaKnown RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 SORBS3O60504 671 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 ASGR1P07306 291 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 MYL3P08590 195 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 SYN1P17600 705 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 NEK4P51957 841 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 COPS5Q92905 334 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 GLT1D1Q96MS3 346 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 PRDM5Q9NQX1 630 aaPredicted RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 GNEQ9Y223 722 aaKnown RBP13.17□□□□□ -0.3
UBASH3B-208ENST00000533451 MOXD2PA6NHM9 499 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 hCG_1984214I3L0E3 225 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 STXBP3O00186 592 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 PQBP1O60828 265 aaKnown RBP13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 SCG2P13521 617 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 CPT1AP50416 773 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 AK2P54819 239 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 GHRHRQ02643 423 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 SSRP1Q08945 709 aaKnown RBP13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 FUT2Q10981 343 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 ANKRD1Q15327 319 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 TRIM60Q495X7 471 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 ZNF713Q8N859 430 aaPredicted RBP13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 TSEN34Q9BSV6 310 aaKnown RBP13.16□□□□□ -0.3
UBASH3B-208ENST00000533451 SMCO2A6NFE2 343 aa13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 PRPF3O43395 683 aaKnown RBP13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 GH1P01241 217 aa13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 CST5P28325 142 aaPredicted RBP13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 KLHDC9Q8NEP7 349 aa13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 ZNF274Q96GC6 653 aaPredicted RBP13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
UBASH3B-208ENST00000533451 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms