RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 SNAP25P60880 206 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 SLFN13Q68D06 897 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 GUF1Q8N442 669 aaKnown RBP17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 DNAJC19Q96DA6 116 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 ERGIC2Q96RQ1 377 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 MRIQ9BWK5 157 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 GTPBP4Q9BZE4 634 aaKnown RBP17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 DHX36Q9H2U1 1008 aaKnown RBP17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 COL11A2P13942 1736 aaPredicted RBP17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 ECE2O60344 883 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 ERCC3P19447 782 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 JAG1P78504 1218 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 TATDN1Q6P1N9 297 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 C2CD5Q86YS7 1000 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 NAPGQ99747 312 aaPredicted RBP17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 NYAP2Q9P242 653 aa17.09■□□□□ 0.33
CACNA1E-208ENST00000533229 EPHB6O15197 1021 aa17.08■□□□□ 0.33
CACNA1E-208ENST00000533229 GDF11O95390 407 aa17.08■□□□□ 0.33
CACNA1E-208ENST00000533229 ZBED6P86452 979 aa17.08■□□□□ 0.33
CACNA1E-208ENST00000533229 CDC37Q16543 378 aaPredicted RBP17.08■□□□□ 0.33
CACNA1E-208ENST00000533229 RETREG2Q8NC44 543 aa17.08■□□□□ 0.33
CACNA1E-208ENST00000533229 NUP58Q9BVL2 599 aa17.08■□□□□ 0.33
CACNA1E-208ENST00000533229 MYO1AQ9UBC5 1043 aa17.08■□□□□ 0.33
CACNA1E-208ENST00000533229 GREB1LQ9C091 1923 aaPredicted RBP17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 MYH8P13535 1937 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 RCCD1A6NED2 376 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 E9PMD0 336 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 MEIS2O14770 477 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 SASH3O75995 380 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 PLA2G4AP47712 749 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 AMPD2Q01433 879 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 TSR1Q2NL82 804 aaKnown RBP17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 CC2D1AQ6P1N0 951 aaPredicted RBP17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 LRRC55Q6ZSA7 311 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 FGFBP2Q9BYJ0 223 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 NDST4Q9H3R1 872 aa17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.32
CACNA1E-208ENST00000533229 MARCH6O60337 910 aa17.07■□□□□ 0.32
CACNA1E-208ENST00000533229 GCFC2P16383 781 aaKnown RBP17.07■□□□□ 0.32
CACNA1E-208ENST00000533229 CHRNA5P30532 468 aa17.07■□□□□ 0.32
CACNA1E-208ENST00000533229 VWA3BQ502W6 1294 aa17.07■□□□□ 0.32
CACNA1E-208ENST00000533229 LACRTQ9GZZ8 138 aa17.07■□□□□ 0.32
CACNA1E-208ENST00000533229 ANKZF1Q9H8Y5 726 aa17.07■□□□□ 0.32
CACNA1E-208ENST00000533229 KCNMB3Q9NPA1 279 aa17.07■□□□□ 0.32
CACNA1E-208ENST00000533229 SIK3Q9Y2K2 1263 aa17.07■□□□□ 0.32
CACNA1E-208ENST00000533229 F5H6K3 240 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 TBC1D8O95759 1140 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 TAL1P17542 331 aaPredicted RBP17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 ICA1Q05084 483 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 KLRC3Q07444 240 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 COASYQ13057 564 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 FIGNQ5HY92 759 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 HYIQ5T013 277 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 CEP112Q8N8E3 955 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 DCAF4Q8WV16 495 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 ANO3Q9BYT9 981 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 HAUS4Q9H6D7 363 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 KIAA1024Q9UPX6 916 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 ENC1O14682 589 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 PLEKP08567 350 aaPredicted RBP17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 STAT3P40763 770 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 RRP1BQ14684 758 aaKnown RBP17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 AOC3Q16853 763 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 FKBP15Q5T1M5 1219 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 CRYGNQ8WXF5 182 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 TDRD3Q9H7E2 651 aaKnown RBP17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 SIPA1L1O43166 1804 aa17.06■□□□□ 0.32
CACNA1E-208ENST00000533229 NPHP3-ACAD11A0A0J9YXS1 232 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 A0A1W2PQJ5 194 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 POTEB3A0JP26 581 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 POTECB2RU33 542 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 FKBP1AP62942 108 aaKnown RBP17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 HDLBPQ00341 1268 aaKnown RBP17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 CYP27A1Q02318 531 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 LRRC63Q05C16 580 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 PSMD2Q13200 908 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 CCDC122Q5T0U0 273 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 POTEBQ6S5H4 581 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 FAM207AQ9NSI2 230 aaPredicted RBP17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 TBC1D7Q9P0N9 293 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 HDAC6Q9UBN7 1215 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 DUSP10Q9Y6W6 482 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 CYP3A7-CYP3A51PA0A087WV96 503 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 H0YIN7 160 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 ZNF263O14978 683 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 CYP3A7P24462 503 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 USP11P51784 963 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 TUBB2AQ13885 445 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 ZCWPW2Q504Y3 356 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 NCAPH2Q6IBW4 605 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 FLAD1Q8NFF5 587 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 TUBB2BQ9BVA1 445 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 LRRC27Q9C0I9 530 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 PANK4Q9NVE7 773 aa17.05■□□□□ 0.32
CACNA1E-208ENST00000533229 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms