RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FAM117BQ6P1L5 589 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 NSMFQ6X4W1 530 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 TICAM2Q86XR7 235 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 RNF135Q8IUD6 432 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 ZNF444Q8N0Y2 327 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 STAG1Q8WVM7 1258 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 NSUN3Q9H649 340 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 CLDND1Q9NY35 253 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 TMEM221A6NGB7 291 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 H3BNC9 293 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 M0R296 226 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 NBNO60934 754 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 RBL2Q08999 1139 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 PPP2R5BQ15173 497 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 MUM1L1Q5H9M0 696 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 CWC27Q6UX04 472 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 SESTD1Q86VW0 696 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 PPP1R13LQ8WUF5 828 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 RUFY2Q8WXA3 655 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 MPHOSPH6Q99547 160 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 UPF2Q9HAU5 1272 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-213ENST00000533149 PLA2G6O60733 806 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 AMHP03971 560 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 CKBP12277 381 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 SLC1A4P43007 532 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 CHMP4BP1P59074 171 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 GPM6BQ13491 265 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 SLFNL1Q499Z3 407 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 ZSCAN25Q6NSZ9 544 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 ERMP1Q7Z2K6 904 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 SP7Q8TDD2 431 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 SCFD2Q8WU76 684 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 FAM227BQ96M60 508 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 WDFY4Q6ZS81 3184 aa13.25□□□□□ -0.29
TRAPPC4-213ENST00000533149 MINDY4BA8MYZ0 360 aa13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 RNF113AO15541 343 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 SGSM2O43147 1006 aa13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 HTRA4P83105 476 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 GIMAP6Q6P9H5 292 aa13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 FBXL6Q8N531 539 aa13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 PURBQ96QR8 312 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 CTAGE1Q96RT6 745 aa13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
TRAPPC4-213ENST00000533149 MYH4Q9Y623 1939 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 STXBP3O00186 592 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 MBTPS2O43462 519 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 REC8O95072 547 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 CHGBP05060 677 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 LTBRP36941 435 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 PDE4DQ08499 809 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 BAATQ14032 418 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 GDF6Q6KF10 455 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 RPAINQ86UA6 219 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 ATOH1Q92858 354 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 USP26Q9BXU7 913 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 C22orf23Q9BZE7 217 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 IL25Q9H293 177 aa13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 TRIP12Q14669 1992 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-213ENST00000533149 EMSYQ7Z589 1322 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 B4DLN1 442 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 LGR5O75473 907 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 ICAM1P05362 532 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 MRPL12P52815 198 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 SMAD4Q13485 552 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 TCTN1Q2MV58 587 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 CTC1Q2NKJ3 1217 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 PPP4R3BQ5MIZ7 849 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 TMEM192Q8IY95 271 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 MYOCDQ8IZQ8 938 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 DHX38Q92620 1227 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 TBC1D32Q96NH3 1257 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 YME1L1Q96TA2 773 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 PRR12Q9ULL5 1215 aa13.22□□□□□ -0.29
TRAPPC4-213ENST00000533149 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 TSPY3P0CV98 308 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 TSPY8P0CW00 308 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 MCCP23508 829 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 PDE4BQ07343 736 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 MCMDC2Q4G0Z9 681 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 RCSD1Q6JBY9 416 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 FBXO11Q86XK2 927 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 C7orf31Q8N865 590 aa13.21□□□□□ -0.29
TRAPPC4-213ENST00000533149 NEDD1Q8NHV4 660 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms