RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 CKBP12277 381 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
CMTM1-216ENST00000533078 LY6KQ17RY6 165 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 ARHGEF16Q5VV41 709 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 DHX37Q8IY37 1157 aaKnown RBP13.51□□□□□ -0.25
CMTM1-216ENST00000533078 RMDN3Q96TC7 470 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 MRPL11Q9Y3B7 192 aaKnown RBP13.51□□□□□ -0.25
CMTM1-216ENST00000533078 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 COL4A4P53420 1690 aaPredicted RBP13.5□□□□□ -0.25
CMTM1-216ENST00000533078 LCHNA4D1U4 455 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 ARHGEF15O94989 841 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 CXCL10P02778 98 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 PSEN2P49810 448 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 HAND2P61296 217 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 ARHGAP1Q07960 439 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 RBL2Q08999 1139 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 PTK7Q13308 1070 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 LAMC2Q13753 1193 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 CDC37Q16543 378 aaPredicted RBP13.5□□□□□ -0.25
CMTM1-216ENST00000533078 PTPROQ16827 1216 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 ALG1Q9BT22 464 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 UBE2ZQ9H832 354 aaPredicted RBP13.5□□□□□ -0.25
CMTM1-216ENST00000533078 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 INSL6Q9Y581 213 aa13.5□□□□□ -0.25
CMTM1-216ENST00000533078 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 LPXNO60711 386 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 EIF3JO75822 258 aaKnown RBP13.49□□□□□ -0.25
CMTM1-216ENST00000533078 AMHP03971 560 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 GOLGA8HP0CJ92 632 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 HSPD1P10809 573 aaKnown RBP13.49□□□□□ -0.25
CMTM1-216ENST00000533078 SSTR3P32745 418 aaPredicted RBP13.49□□□□□ -0.25
CMTM1-216ENST00000533078 ERVK-21P61565 698 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 DEFB103AP81534 67 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 MFSD10Q14728 455 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 PUS10Q3MIT2 529 aaKnown RBP13.49□□□□□ -0.25
CMTM1-216ENST00000533078 ASPRV1Q53RT3 343 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 FAM117BQ6P1L5 589 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 DGKHQ86XP1 1220 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 PPTC7Q8NI37 304 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 EMID1Q96A84 441 aaPredicted RBP13.49□□□□□ -0.25
CMTM1-216ENST00000533078 HDAC6Q9UBN7 1215 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 FAM50BQ9Y247 325 aa13.49□□□□□ -0.25
CMTM1-216ENST00000533078 BRWD1Q9NSI6 2320 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 CCDC171Q6TFL3 1326 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 ZNF213O14771 459 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 KCNA5P22460 613 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 CSPP1Q1MSJ5 1256 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 KIAA0753Q2KHM9 967 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 KCNV1Q6PIU1 500 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
CMTM1-216ENST00000533078 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 PNMA1Q8ND90 353 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 FBXO22Q8NEZ5 403 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 SYTL5Q8TDW5 730 aaPredicted RBP13.48□□□□□ -0.25
CMTM1-216ENST00000533078 FAM227BQ96M60 508 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 SAMD11Q96NU1 681 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 TAAR1Q96RJ0 339 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 SUGCTQ9HAC7 445 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 DDX41Q9UJV9 622 aaKnown RBP13.48□□□□□ -0.25
CMTM1-216ENST00000533078 KIAA1217Q5T5P2 1943 aa13.48□□□□□ -0.25
CMTM1-216ENST00000533078 MYH6P13533 1939 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 LINC01553A4QN01 128 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 PI4K2BG5E9Z4 385 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 NBNO60934 754 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 LGR5O75473 907 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 F2P00734 622 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 CFBP00751 764 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 ZNF286BP0CG31 522 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 ALADP13716 330 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 EIF2AK2P19525 551 aaKnown RBP13.47□□□□□ -0.25
CMTM1-216ENST00000533078 LEXMQ3ZCV2 418 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 TIGD5Q53EQ6 642 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 GJD3Q8N144 294 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 KAT2BQ92831 832 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 ZKSCAN3Q9BRR0 538 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 PCDHB15Q9Y5E8 787 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 PTPRSQ13332 1948 aa13.47□□□□□ -0.25
CMTM1-216ENST00000533078 SIP14410 1827 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 PRR33A8MZF0 331 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 NR3C2P08235 984 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 PARP1P09874 1014 aaKnown RBP13.46□□□□□ -0.25
CMTM1-216ENST00000533078 THPOP40225 353 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 PDE1AP54750 535 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 TRAF1Q13077 416 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 NMIQ13287 307 aaPredicted RBP13.46□□□□□ -0.25
CMTM1-216ENST00000533078 ZNF618Q5T7W0 954 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 PTCRAQ6ISU1 281 aaPredicted RBP13.46□□□□□ -0.25
CMTM1-216ENST00000533078 SPRED2Q7Z698 418 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 DHX38Q92620 1227 aaKnown RBP13.46□□□□□ -0.25
CMTM1-216ENST00000533078 RILPL2Q969X0 211 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms