RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 BACH2Q9BYV9 841 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 MRVI1Q9Y6F6 885 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 LTBP2Q14767 1821 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 FRMPD4Q14CM0 1322 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 KLF18A0A0U1RQI7 1052 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 STAM2O75886 525 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 MYL3P08590 195 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 MYCLP12524 364 aaPredicted RBP19.19■□□□□ 0.66
PKP3-209ENST00000533069 PSMA5P28066 241 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 ARHGAP1Q07960 439 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 RTN1Q16799 776 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 CMTR1Q8N1G2 835 aaKnown RBP19.19■□□□□ 0.66
PKP3-209ENST00000533069 SMARCC2Q8TAQ2 1214 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 EMID1Q96A84 441 aaPredicted RBP19.19■□□□□ 0.66
PKP3-209ENST00000533069 UPF2Q9HAU5 1272 aaKnown RBP19.19■□□□□ 0.66
PKP3-209ENST00000533069 DDX41Q9UJV9 622 aaKnown RBP19.19■□□□□ 0.66
PKP3-209ENST00000533069 BRPF3Q9ULD4 1205 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 GRIN2DO15399 1336 aa19.19■□□□□ 0.66
PKP3-209ENST00000533069 GOLGA8AA7E2F4 631 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 GOLGA8BA8MQT2 603 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 TIMP1P01033 207 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 CD4P01730 458 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 ITGB8P26012 769 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 PSMC6P62333 389 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 FPGSQ05932 587 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 LY6KQ17RY6 165 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 TEX2Q8IWB9 1127 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 FBXL16Q8N461 479 aa19.18■□□□□ 0.66
PKP3-209ENST00000533069 MYH6P13533 1939 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 TGFB3P10600 412 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 LAMC2Q13753 1193 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 GNPTABQ3T906 1256 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 GPR153Q6NV75 609 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 XRRA1Q6P2D8 792 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 CCDC82Q8N4S0 544 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 IL31RAQ8NI17 732 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 PSTPIP2Q9H939 334 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 CNTNAP5Q8WYK1 1306 aa19.17■□□□□ 0.66
PKP3-209ENST00000533069 CCDC196A0A1B0GTZ2 297 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 SOX1O00570 391 aaPredicted RBP19.16■□□□□ 0.66
PKP3-209ENST00000533069 MEIS2O14770 477 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 RGS20O76081 388 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 MMP3P08254 477 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 RPS6KB1P23443 525 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 MFSD5Q6N075 450 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 PPP1R18Q6NYC8 613 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 USP17L6PQ6QN14 398 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 Q6ZUG5 572 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 HEATR3Q7Z4Q2 680 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 AFG1LQ8WV93 481 aa19.16■□□□□ 0.66
PKP3-209ENST00000533069 ALDH8A1Q9H2A2 487 aaPredicted RBP19.16■□□□□ 0.66
PKP3-209ENST00000533069 hCG_1984214I3L0E3 225 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 SUPT20HL2P0C7V6 817 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 CPA1P15085 419 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 CASTP20810 708 aaKnown RBP19.15■□□□□ 0.66
PKP3-209ENST00000533069 METAP2P50579 478 aaKnown RBP eCLIP19.15■□□□□ 0.669e-6■□□□□ 8.1
PKP3-209ENST00000533069 PTPN11Q06124 597 aaPredicted RBP19.15■□□□□ 0.66
PKP3-209ENST00000533069 FUT2Q10981 343 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 DGKDQ16760 1214 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 NFRKBQ6P4R8 1299 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 DHX37Q8IY37 1157 aaKnown RBP19.15■□□□□ 0.66
PKP3-209ENST00000533069 ZNF713Q8N859 430 aaPredicted RBP19.15■□□□□ 0.66
PKP3-209ENST00000533069 PPTC7Q8NI37 304 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 BRF1Q92994 677 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 NAP1L2Q9ULW6 460 aaPredicted RBP19.15■□□□□ 0.66
PKP3-209ENST00000533069 NID2Q14112 1375 aa19.15■□□□□ 0.66
PKP3-209ENST00000533069 LAMA3Q16787 3333 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 hCG_1642624A0A1W2PR95 340 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 B4GALT4O60513 344 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 PPIGQ13427 754 aaKnown RBP eCLIP19.14■□□□□ 0.65
PKP3-209ENST00000533069 SHHQ15465 462 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 PCNX4Q63HM2 1172 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 TMEM199Q8N511 208 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 LRCH3Q96II8 777 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 INPP4AQ96PE3 977 aaPredicted RBP19.14■□□□□ 0.65
PKP3-209ENST00000533069 USP26Q9BXU7 913 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 AGXT2Q9BYV1 514 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 TRPV6Q9H1D0 765 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 HIPK3Q9H422 1215 aa19.14■□□□□ 0.65
PKP3-209ENST00000533069 UBA1P22314 1058 aaKnown RBP19.13■□□□□ 0.65
PKP3-209ENST00000533069 ICAM3P32942 547 aa19.13■□□□□ 0.65
PKP3-209ENST00000533069 MRPS9P82933 396 aaKnown RBP19.13■□□□□ 0.65
PKP3-209ENST00000533069 APOBRQ0VD83 1088 aa19.13■□□□□ 0.65
PKP3-209ENST00000533069 NBPF20Q3BBV1 942 aa19.13■□□□□ 0.65
PKP3-209ENST00000533069 C9orf50Q5SZB4 431 aa19.13■□□□□ 0.65
PKP3-209ENST00000533069 CELF3Q5SZQ8 465 aaKnown RBP19.13■□□□□ 0.65
PKP3-209ENST00000533069 WWC2Q6AWC2 1192 aa19.13■□□□□ 0.65
PKP3-209ENST00000533069 GPKOWQ92917 476 aaPredicted RBP eCLIP19.13■□□□□ 0.65
PKP3-209ENST00000533069 PPP1R12CQ9BZL4 782 aa19.13■□□□□ 0.65
PKP3-209ENST00000533069 FAM217BQ9NTX9 383 aaPredicted RBP19.13■□□□□ 0.65
PKP3-209ENST00000533069 SPDYE3A6NKU9 549 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 FIBPO43427 364 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 GGPS1O95749 300 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 HOXD8P13378 290 aaPredicted RBP19.12■□□□□ 0.65
PKP3-209ENST00000533069 CDC27P30260 824 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 NAPAP54920 295 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 FAM47CQ5HY64 1035 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 MYSM1Q5VVJ2 828 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 RUFY3Q7L099 469 aa19.12■□□□□ 0.65
PKP3-209ENST00000533069 SPATA33Q96N06 139 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms