RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 CFAP58Q5T655 872 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 ARL6IP4Q66PJ3 421 aaKnown RBP16.46■□□□□ 0.23
NXF1-213ENST00000532297 TTYH3Q9C0H2 523 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 TMEM260Q9NX78 707 aa16.46■□□□□ 0.23
NXF1-213ENST00000532297 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 RASSF10A6NK89 507 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 STXBP3O00186 592 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 CALML3P27482 149 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 KIF5BP33176 963 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 ACTN3Q08043 901 aaPredicted RBP16.45■□□□□ 0.22
NXF1-213ENST00000532297 IFT88Q13099 833 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 TXNRD1Q16881 649 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 C12orf60Q5U649 245 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 CCDC13Q8IYE1 715 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 NUP58Q9BVL2 599 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 ATP8A2Q9NTI2 1148 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 ZNF233A6NK53 670 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 M0R2N6 131 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 PPP1R37O75864 691 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 NR1D1P20393 614 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 UBA7P41226 1012 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 TBC1D8BQ0IIM8 1120 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 STK4Q13043 487 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 PTGISQ16647 500 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 FAM212AQ96EL1 285 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 CCT8L2Q96SF2 557 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 DUSP9Q99956 384 aaKnown RBP16.45■□□□□ 0.22
NXF1-213ENST00000532297 TMEM47Q9BQJ4 181 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 IFIH1Q9BYX4 1025 aaKnown RBP16.45■□□□□ 0.22
NXF1-213ENST00000532297 THAP9Q9H5L6 903 aa16.45■□□□□ 0.22
NXF1-213ENST00000532297 CCNT1O60563 726 aaKnown RBP16.44■□□□□ 0.22
NXF1-213ENST00000532297 SLURP2P0DP57 97 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 PRLRP16471 622 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 TCP1P17987 556 aaKnown RBP16.44■□□□□ 0.22
NXF1-213ENST00000532297 IBSPP21815 317 aaPredicted RBP16.44■□□□□ 0.22
NXF1-213ENST00000532297 TECP42680 631 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 PAFAH1B1P43034 410 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 SMTNP53814 917 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
NXF1-213ENST00000532297 NLRP3Q96P20 1036 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 UBA5Q9GZZ9 404 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 SH2D4AQ9H788 454 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 MCM8Q9UJA3 840 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 HYOU1Q9Y4L1 999 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 C21orf2O43822 256 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 SCP2P22307 547 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 ELF1P32519 619 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 NF2P35240 595 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
NXF1-213ENST00000532297 NLRP14Q86W24 1093 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 MYCBPAPQ8TBZ2 947 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 RBM12Q9NTZ6 932 aaKnown RBP16.44■□□□□ 0.22
NXF1-213ENST00000532297 FLT1P17948 1338 aa16.44■□□□□ 0.22
NXF1-213ENST00000532297 FAM153BP0C7A2 387 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 CDR1P51861 262 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 FAM153CQ494X1 144 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 PREPLQ4J6C6 727 aaPredicted RBP16.43■□□□□ 0.22
NXF1-213ENST00000532297 ANKRD40Q6AI12 368 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 IQCKQ8N0W5 287 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 RETREG2Q8NC44 543 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 N4BP2L2Q92802 583 aaPredicted RBP16.43■□□□□ 0.22
NXF1-213ENST00000532297 SETDB2Q96T68 719 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 FAM153AQ9UHL3 310 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 NFU1Q9UMS0 254 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 FRMPD2Q68DX3 1309 aaPredicted RBP16.43■□□□□ 0.22
NXF1-213ENST00000532297 EPHB6O15197 1021 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 NCK2O43639 380 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 TNFRSF8P28908 595 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 CARSP49589 748 aaKnown RBP16.43■□□□□ 0.22
NXF1-213ENST00000532297 ASIC1P78348 528 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 GRM4Q14833 912 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 CEP85LQ5SZL2 805 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 TTI2Q6NXR4 508 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 GLIS3Q8NEA6 775 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 IFT81Q8WYA0 676 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 BIN2Q9UBW5 565 aaPredicted RBP16.43■□□□□ 0.22
NXF1-213ENST00000532297 PCDHA13Q9Y5I0 950 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 NRAPQ86VF7 1730 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 MYH10P35580 1976 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 E7EVH7 732 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 PSMA7O14818 248 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 RASSF9O75901 435 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 NAPAP54920 295 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 PDE4DQ08499 809 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 ALS2CR12Q96Q35 445 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 SLC40A1Q9NP59 571 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 SLC39A2Q9NP94 309 aa16.43■□□□□ 0.22
NXF1-213ENST00000532297 ESYT3A0FGR9 886 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
NXF1-213ENST00000532297 TM4SF1P30408 202 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 MDH1P40925 334 aaKnown RBP16.42■□□□□ 0.22
NXF1-213ENST00000532297 KCTD19Q17RG1 926 aaPredicted RBP16.42■□□□□ 0.22
NXF1-213ENST00000532297 CABP7Q86V35 215 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 ODF2LQ9ULJ1 636 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms