RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 DGKHQ86XP1 1220 aa20.27■□□□□ 0.84
PKP3-208ENST00000531857 AFAP1L1Q8TED9 768 aa20.27■□□□□ 0.84
PKP3-208ENST00000531857 ESR2Q92731 530 aa20.27■□□□□ 0.84
PKP3-208ENST00000531857 CRBNQ96SW2 442 aa20.27■□□□□ 0.84
PKP3-208ENST00000531857 BRWD1Q9NSI6 2320 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 TRIM6-TRIM34B2RNG4 842 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 KCNJ6P48051 423 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 DEFB103AP81534 67 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 LRRC8DQ7L1W4 858 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 TICAM2Q86XR7 235 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 ADGRF4Q8IZF3 695 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 CCDC155Q8N6L0 562 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 PNMA1Q8ND90 353 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 CAGE1Q8TC20 777 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 NSUN6Q8TEA1 469 aaKnown RBP20.26■□□□□ 0.83
PKP3-208ENST00000531857 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 ABCB11O95342 1321 aa20.26■□□□□ 0.83
PKP3-208ENST00000531857 NBNO60934 754 aa20.25■□□□□ 0.83
PKP3-208ENST00000531857 SELPP16109 830 aa20.25■□□□□ 0.83
PKP3-208ENST00000531857 HDAC1Q13547 482 aaPredicted RBP20.25■□□□□ 0.83
PKP3-208ENST00000531857 RMDN3Q96TC7 470 aa20.25■□□□□ 0.83
PKP3-208ENST00000531857 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
PKP3-208ENST00000531857 RNF41Q9H4P4 317 aaPredicted RBP20.25■□□□□ 0.83
PKP3-208ENST00000531857 HDAC6Q9UBN7 1215 aa20.25■□□□□ 0.83
PKP3-208ENST00000531857 COG5Q9UP83 839 aa20.25■□□□□ 0.83
PKP3-208ENST00000531857 KDM4AO75164 1064 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 CKBP12277 381 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 SDSP20132 328 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 CASTP20810 708 aaKnown RBP20.24■□□□□ 0.83
PKP3-208ENST00000531857 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
PKP3-208ENST00000531857 STXBP2Q15833 593 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 QRICH1Q2TAL8 776 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 HLA-CQ95604 372 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 IWS1Q96ST2 819 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 EPHX3Q9H6B9 360 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 GTF2IRD1Q9UHL9 959 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 DDX41Q9UJV9 622 aaKnown RBP20.24■□□□□ 0.83
PKP3-208ENST00000531857 MICAL3Q7RTP6 2002 aa20.24■□□□□ 0.83
PKP3-208ENST00000531857 ZNF213O14771 459 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 CXCL10P02778 98 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 EIF2AK2P19525 551 aaKnown RBP20.23■□□□□ 0.83
PKP3-208ENST00000531857 PLA2G5P39877 138 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 RBL2Q08999 1139 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 DGKDQ16760 1214 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 CNKSR3Q6P9H4 555 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 GDPD5Q8WTR4 605 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 WNT8BQ93098 351 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 ALG1Q9BT22 464 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 ZBED2Q9BTP6 218 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 C1QTNF1Q9BXJ1 281 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 MAF1Q9H063 256 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 KAT14Q9H8E8 782 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 VAT1LQ9HCJ6 419 aa20.23■□□□□ 0.83
PKP3-208ENST00000531857 B4E1Z4 1266 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 ZNF286BP0CG31 522 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 PSEN2P49810 448 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 ARHGEF16Q5VV41 709 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 TRAF7Q6Q0C0 670 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 IQCA1Q86XH1 822 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 MCF2L2Q86YR7 1114 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 C7orf31Q8N865 590 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 ENAHQ8N8S7 591 aaPredicted RBP20.22■□□□□ 0.83
PKP3-208ENST00000531857 ANKS1AQ92625 1134 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 ZSCAN10Q96SZ4 725 aaPredicted RBP20.22■□□□□ 0.83
PKP3-208ENST00000531857 JMJD4Q9H9V9 463 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 DOCK5Q9H7D0 1870 aa20.22■□□□□ 0.83
PKP3-208ENST00000531857 OPLAHO14841 1288 aa20.21■□□□□ 0.83
PKP3-208ENST00000531857 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
PKP3-208ENST00000531857 EIF3JO75822 258 aaKnown RBP20.21■□□□□ 0.83
PKP3-208ENST00000531857 MFAP1P55081 439 aaKnown RBP20.21■□□□□ 0.83
PKP3-208ENST00000531857 ZNF200P98182 395 aaPredicted RBP20.21■□□□□ 0.83
PKP3-208ENST00000531857 MFSD10Q14728 455 aa20.21■□□□□ 0.83
PKP3-208ENST00000531857 TRIM71Q2Q1W2 868 aaKnown RBP20.21■□□□□ 0.83
PKP3-208ENST00000531857 ASPRV1Q53RT3 343 aa20.21■□□□□ 0.83
PKP3-208ENST00000531857 FBXO11Q86XK2 927 aa20.21■□□□□ 0.83
PKP3-208ENST00000531857 KHSRPQ92945 711 aaKnown RBP eCLIP20.21■□□□□ 0.83
PKP3-208ENST00000531857 EMID1Q96A84 441 aaPredicted RBP20.21■□□□□ 0.83
PKP3-208ENST00000531857 PXMP2Q9NR77 195 aa20.21■□□□□ 0.83
PKP3-208ENST00000531857 ZSWIM5Q9P217 1185 aa20.21■□□□□ 0.83
PKP3-208ENST00000531857 MTUS1Q9ULD2 1270 aa20.21■□□□□ 0.83
PKP3-208ENST00000531857 MRPL11Q9Y3B7 192 aaKnown RBP20.21■□□□□ 0.83
PKP3-208ENST00000531857 HAS3O00219 553 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 GJB5O95377 273 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 F2P00734 622 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 CFBP00751 764 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 NR3C2P08235 984 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 HIC1Q14526 733 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 MBTPS1Q14703 1052 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 KIAA0753Q2KHM9 967 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 CWC27Q6UX04 472 aaKnown RBP20.2■□□□□ 0.82
PKP3-208ENST00000531857 FAM122AQ96E09 287 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 SUGCTQ9HAC7 445 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 MRVI1Q9Y6F6 885 aa20.2■□□□□ 0.82
PKP3-208ENST00000531857 BAZ2BQ9UIF8 2168 aaKnown RBP20.19■□□□□ 0.82
PKP3-208ENST00000531857 ABHD14A-ACY1A0A1B0GW23 586 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 SORBS3O60504 671 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 RGS20O76081 388 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 PARNO95453 639 aaKnown RBP20.19■□□□□ 0.82
PKP3-208ENST00000531857 PARP1P09874 1014 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms