RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	GH1	P01241	217 aa		24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	EIF2AK2	P19525	551 aa	Known RBP	24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	MRPL12	P52815	198 aa	Known RBP	24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	MFAP1	P55081	439 aa	Known RBP	24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	BFSP2	Q13515	415 aa		24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	CHD1L	Q86WJ1	897 aa		24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	IQCA1	Q86XH1	822 aa		24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	NSUN6	Q8TEA1	469 aa	Known RBP	24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	ARNTL2	Q8WYA1	636 aa		24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	RMDN3	Q96TC7	470 aa		24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	OSBPL3	Q9H4L5	887 aa		24.55	■■□□□ 1.52
FDFT1-220	ENST00000531733	NCOR1	O75376	2440 aa		24.54	■■□□□ 1.52
FDFT1-220	ENST00000531733	BMP1	P13497	986 aa		24.54	■■□□□ 1.52
FDFT1-220	ENST00000531733	COL9A1	P20849	921 aa		24.54	■■□□□ 1.52
FDFT1-220	ENST00000531733	KCNQ1	P51787	676 aa		24.54	■■□□□ 1.52
FDFT1-220	ENST00000531733	ASPRV1	Q53RT3	343 aa		24.54	■■□□□ 1.52
FDFT1-220	ENST00000531733	STAG2	Q8N3U4	1231 aa		24.54	■■□□□ 1.52
FDFT1-220	ENST00000531733	PHOSPHO2	Q8TCD6	241 aa		24.54	■■□□□ 1.52
FDFT1-220	ENST00000531733	DDX41	Q9UJV9	622 aa	Known RBP	24.54	■■□□□ 1.52
FDFT1-220	ENST00000531733	LCHN	A4D1U4	455 aa		24.53	■■□□□ 1.52
FDFT1-220	ENST00000531733	POU3F3	P20264	500 aa	Predicted RBP	24.53	■■□□□ 1.52
FDFT1-220	ENST00000531733	NUCB1	Q02818	461 aa		24.53	■■□□□ 1.52
FDFT1-220	ENST00000531733	STXBP2	Q15833	593 aa		24.53	■■□□□ 1.52
FDFT1-220	ENST00000531733	SESTD1	Q86VW0	696 aa		24.53	■■□□□ 1.52
FDFT1-220	ENST00000531733	FBXO11	Q86XK2	927 aa		24.53	■■□□□ 1.52
FDFT1-220	ENST00000531733	DHX16	O60231	1041 aa	Known RBP	24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	PPP1R11	O60927	126 aa	Predicted RBP	24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	PARP1	P09874	1014 aa	Known RBP	24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	SKIV2L	Q15477	1246 aa	Known RBP	24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	WNT8B	Q93098	351 aa		24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	IWS1	Q96ST2	819 aa		24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	PXMP2	Q9NR77	195 aa		24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	DIAPH3	Q9NSV4	1193 aa		24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	HDAC6	Q9UBN7	1215 aa		24.52	■■□□□ 1.52
FDFT1-220	ENST00000531733	COL4A4	P53420	1690 aa	Predicted RBP	24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	SORBS3	O60504	671 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	NBN	O60934	754 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	RGS20	O76081	388 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	CFB	P00751	764 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	ZNF286B	P0CG31	522 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	WDR5	P61964	334 aa	Known RBP	24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	DEFB103A	P81534	67 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	HIC1	Q14526	733 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	CCDC178	Q5BJE1	867 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	ARHGEF16	Q5VV41	709 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	LRRC8D	Q7L1W4	858 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	MCF2L2	Q86YR7	1114 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	CAGE1	Q8TC20	777 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	AFAP1L1	Q8TED9	768 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	ALG1	Q9BT22	464 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	DSCC1	Q9BVC3	393 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	GTF2IRD1	Q9UHL9	959 aa		24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	MRPL11	Q9Y3B7	192 aa	Known RBP	24.51	■■□□□ 1.51
FDFT1-220	ENST00000531733	LPXN	O60711	386 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	BAIAP3	O94812	1187 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	NR3C2	P08235	984 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	SELP	P16109	830 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	CAST	P20810	708 aa	Known RBP	24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	PSEN2	P49810	448 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	ZNF200	P98182	395 aa	Predicted RBP	24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	GRB10	Q13322	594 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	SLC35G1	Q2M3R5	365 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	TRAF7	Q6Q0C0	670 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	MAF1	Q9H063	256 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	TSPYL2	Q9H2G4	693 aa	Predicted RBP	24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	RWDD1	Q9H446	243 aa	Predicted RBP	24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	MYH7B	A7E2Y1	1941 aa		24.5	■■□□□ 1.51
FDFT1-220	ENST00000531733	TLL1	O43897	1013 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	EIF3J	O75822	258 aa	Known RBP	24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	CKB	P12277	381 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	HSD17B4	P51659	736 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	RBL2	Q08999	1139 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	DGKD	Q16760	1214 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	CCDC155	Q8N6L0	562 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	IL27	Q8NEV9	243 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	IL31RA	Q8NI17	732 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	EMID1	Q96A84	441 aa	Predicted RBP	24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	ZFP91	Q96JP5	570 aa	Predicted RBP	24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	MRVI1	Q9Y6F6	885 aa		24.49	■■□□□ 1.51
FDFT1-220	ENST00000531733	HAS3	O00219	553 aa		24.48	■■□□□ 1.51
FDFT1-220	ENST00000531733	GTPBP6	O43824	516 aa	Predicted RBP	24.48	■■□□□ 1.51
FDFT1-220	ENST00000531733	CXCL10	P02778	98 aa		24.48	■■□□□ 1.51
FDFT1-220	ENST00000531733	SEC23A	Q15436	765 aa		24.48	■■□□□ 1.51
FDFT1-220	ENST00000531733	IMMT	Q16891	758 aa	Known RBP	24.48	■■□□□ 1.51
FDFT1-220	ENST00000531733	TRIM71	Q2Q1W2	868 aa	Known RBP	24.48	■■□□□ 1.51
FDFT1-220	ENST00000531733	CYB5R4	Q7L1T6	521 aa		24.48	■■□□□ 1.51
FDFT1-220	ENST00000531733	F2	P00734	622 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	HOXA13	P31271	388 aa	Predicted RBP	24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	KCNJ6	P48051	423 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	NT5C2	P49902	561 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	GHRHR	Q02643	423 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	MBTPS1	Q14703	1052 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	MFSD10	Q14728	455 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	KIAA0753	Q2KHM9	967 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	C7orf31	Q8N865	590 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	PPTC7	Q8NI37	304 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	MTMR8	Q96EF0	704 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	PDCD2L	Q9BRP1	358 aa		24.47	■■□□□ 1.51
FDFT1-220	ENST00000531733	AMN	Q9BXJ7	453 aa		24.47	■■□□□ 1.51

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms