RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 GRB10Q13322 594 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 SDE2Q6IQ49 451 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 ADAT2Q7Z6V5 191 aaKnown RBP6.43□□□□□ -1.38
USP47-211ENST00000531513 ANKRD13AQ8IZ07 590 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 LINC00482Q8N8I6 264 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 USP33Q8TEY7 942 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 CRBNQ96SW2 442 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 SYT3Q9BQG1 590 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 GORASP1Q9BQQ3 440 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 A0A1W2PQH9 124 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 C7orf72A4D263 438 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 NTRK1P04629 796 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 NBPF6Q5VWK0 638 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 CKAP2LQ8IYA6 745 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 ARHGEF39Q8N4T4 335 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 OR6P1Q8NGX9 317 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 KLHL6Q8WZ60 621 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 SHDQ96IW2 340 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 NBPF4Q96M43 638 aa6.42□□□□□ -1.38
USP47-211ENST00000531513 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.42□□□□□ -1.38
USP47-211ENST00000531513 TRBV23OR9-2A0A075B6M9 112 aa6.41□□□□□ -1.38
USP47-211ENST00000531513 MATN3O15232 486 aa6.41□□□□□ -1.38
USP47-211ENST00000531513 NPHS1O60500 1241 aa6.41□□□□□ -1.38
USP47-211ENST00000531513 FUCA1P04066 466 aa6.41□□□□□ -1.38
USP47-211ENST00000531513 SSBP05455 408 aaKnown RBP eCLIP6.41□□□□□ -1.38
USP47-211ENST00000531513 THBS2P35442 1172 aa6.41□□□□□ -1.38
USP47-211ENST00000531513 BMS1Q14692 1282 aaKnown RBP6.41□□□□□ -1.38
USP47-211ENST00000531513 NFE2L2Q16236 605 aa6.41□□□□□ -1.38
USP47-211ENST00000531513 MBLAC2Q68D91 279 aa6.41□□□□□ -1.38
USP47-211ENST00000531513 RCC1LQ96I51 464 aaKnown RBP6.41□□□□□ -1.38
USP47-211ENST00000531513 PLATP00750 562 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 NASPP49321 788 aaPredicted RBP6.4□□□□□ -1.38
USP47-211ENST00000531513 ZXDAP98168 799 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 RGL3Q3MIN7 710 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 TBC1D10BQ4KMP7 808 aaPredicted RBP6.4□□□□□ -1.38
USP47-211ENST00000531513 EGFLAMQ63HQ2 1017 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 DCP2Q8IU60 420 aaKnown RBP6.4□□□□□ -1.38
USP47-211ENST00000531513 PLEKHO2Q8TD55 490 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 LOXL4Q96JB6 756 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 C8orf49Q96NF6 230 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 C11orf84Q9BUA3 381 aaPredicted RBP6.4□□□□□ -1.38
USP47-211ENST00000531513 CLEC1BQ9P126 229 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 SUGT1Q9Y2Z0 365 aa6.4□□□□□ -1.38
USP47-211ENST00000531513 SBNO2Q9Y2G9 1366 aa6.4□□□□□ -1.39
USP47-211ENST00000531513 AKAP8O43823 692 aaKnown RBP6.39□□□□□ -1.39
USP47-211ENST00000531513 ZNF20P17024 532 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 RPL13P26373 211 aaKnown RBP6.39□□□□□ -1.39
USP47-211ENST00000531513 CASP7P55210 303 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 CPZQ66K79 652 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 ETV3LQ6ZN32 361 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 FAM26EQ8N5C1 309 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 TTC9BQ8N6N2 239 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 ZNF513Q8N8E2 541 aaPredicted RBP6.39□□□□□ -1.39
USP47-211ENST00000531513 MKL1Q969V6 931 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 MRFAP1L1Q96HT8 127 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 SAMD11Q96NU1 681 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 MARCH2Q9P0N8 246 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 APEX2Q9UBZ4 518 aa6.39□□□□□ -1.39
USP47-211ENST00000531513 PLS3P13797 630 aa6.38□□□□□ -1.39
USP47-211ENST00000531513 SERINC3Q13530 473 aa6.38□□□□□ -1.39
USP47-211ENST00000531513 MIB1Q86YT6 1006 aa6.38□□□□□ -1.39
USP47-211ENST00000531513 FAM169BQ8N8A8 192 aa6.38□□□□□ -1.39
USP47-211ENST00000531513 KYQ8NBH2 561 aa6.38□□□□□ -1.39
USP47-211ENST00000531513 DPF3Q92784 378 aa6.38□□□□□ -1.39
USP47-211ENST00000531513 ZNF408Q9H9D4 720 aa6.38□□□□□ -1.39
USP47-211ENST00000531513 STRIP2Q9ULQ0 834 aa6.38□□□□□ -1.39
USP47-211ENST00000531513 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.38□□□□□ -1.39
USP47-211ENST00000531513 C1QTNF3-AMACRE9PGA6 284 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 ETFBP38117 255 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 SCRN1Q12765 414 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 FAM26FQ5R3K3 315 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 STK32CQ86UX6 486 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 JAZF1Q86VZ6 243 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 TEX2Q8IWB9 1127 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 COPS5Q92905 334 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 C1QTNF3Q9BXJ4 246 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 AP5M1Q9H0R1 490 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 PCDH18Q9HCL0 1135 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 GPRC5CQ9NQ84 441 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 AKT3Q9Y243 479 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 INVSQ9Y283 1065 aa6.37□□□□□ -1.39
USP47-211ENST00000531513 SGSM2O43147 1006 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 KCNH1O95259 989 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 THBDP07204 575 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 ITGA1P56199 1179 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 RBM10P98175 930 aaKnown RBP6.36□□□□□ -1.39
USP47-211ENST00000531513 KIAA1211LQ6NV74 962 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 CD300LDQ6UXZ3 194 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 ANKS3Q6ZW76 656 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 LGI4Q8N135 537 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 MMP19Q99542 508 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 SSBP3Q9BWW4 388 aaPredicted RBP6.36□□□□□ -1.39
USP47-211ENST00000531513 BTG4Q9NY30 223 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 SIRPGQ9P1W8 387 aa6.36□□□□□ -1.39
USP47-211ENST00000531513 ANKRD34BA5PLL1 514 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 MROH6A6NGR9 719 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 KLF4O43474 513 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 HSD3B2P26439 372 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 KIAA2012Q0VF49 1180 aa6.35□□□□□ -1.39
USP47-211ENST00000531513 PPP2R5EQ16537 467 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms