RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SH3RF3Q8TEJ3 882 aaPredicted RBP7.92□□□□□ -1.14
PTPRK-220ENST00000531466 COPS5Q92905 334 aa7.92□□□□□ -1.14
PTPRK-220ENST00000531466 MMP19Q99542 508 aa7.92□□□□□ -1.14
PTPRK-220ENST00000531466 SOX9P48436 509 aa7.91□□□□□ -1.14
PTPRK-220ENST00000531466 INF2Q27J81 1249 aa7.91□□□□□ -1.14
PTPRK-220ENST00000531466 MILR1Q7Z6M3 343 aa7.91□□□□□ -1.14
PTPRK-220ENST00000531466 SEC14L1Q92503 715 aa7.91□□□□□ -1.14
PTPRK-220ENST00000531466 ANKRD34BA5PLL1 514 aa7.9□□□□□ -1.14
PTPRK-220ENST00000531466 FPR2P25090 351 aa7.9□□□□□ -1.14
PTPRK-220ENST00000531466 FAM126BQ8IXS8 530 aa7.9□□□□□ -1.14
PTPRK-220ENST00000531466 OR6P1Q8NGX9 317 aa7.9□□□□□ -1.14
PTPRK-220ENST00000531466 KISS1RQ969F8 398 aaPredicted RBP7.9□□□□□ -1.14
PTPRK-220ENST00000531466 LCORQ96JN0 433 aaPredicted RBP7.9□□□□□ -1.14
PTPRK-220ENST00000531466 SORCS2Q96PQ0 1159 aa7.9□□□□□ -1.14
PTPRK-220ENST00000531466 EMC9Q9Y3B6 208 aa7.9□□□□□ -1.14
PTPRK-220ENST00000531466 B4GALT3O60512 393 aa7.89□□□□□ -1.15
PTPRK-220ENST00000531466 TACR2P21452 398 aa7.89□□□□□ -1.15
PTPRK-220ENST00000531466 RBM10P98175 930 aaKnown RBP7.89□□□□□ -1.15
PTPRK-220ENST00000531466 PRAMEF18Q5VWM3 479 aa7.89□□□□□ -1.15
PTPRK-220ENST00000531466 VHLLQ6RSH7 139 aa7.89□□□□□ -1.15
PTPRK-220ENST00000531466 ZNF654Q8IZM8 581 aa7.89□□□□□ -1.15
PTPRK-220ENST00000531466 LAMTOR5O43504 91 aa7.88□□□□□ -1.15
PTPRK-220ENST00000531466 SLC6A11P48066 632 aa7.88□□□□□ -1.15
PTPRK-220ENST00000531466 ICAM4Q14773 271 aa7.88□□□□□ -1.15
PTPRK-220ENST00000531466 CDSNQ15517 529 aa7.88□□□□□ -1.15
PTPRK-220ENST00000531466 YIPF4Q9BSR8 244 aa7.88□□□□□ -1.15
PTPRK-220ENST00000531466 LGR4Q9BXB1 951 aa7.88□□□□□ -1.15
PTPRK-220ENST00000531466 PPP4R1LQ9P1A2 415 aa7.88□□□□□ -1.15
PTPRK-220ENST00000531466 CYP1A1P04798 512 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-220ENST00000531466 ADAM9Q13443 819 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 CR1LQ2VPA4 569 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 GTF2IRD2BQ6EKJ0 949 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 POMZP3Q6PJE2 187 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 GTF2IRD2Q86UP8 949 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 Q8N1X5 172 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 BVESQ8NE79 360 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 FRS2Q8WU20 508 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 PPP1R14AQ96A00 147 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 ZSWIM3Q96MP5 696 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 TSC22D4Q9Y3Q8 395 aa7.87□□□□□ -1.15
PTPRK-220ENST00000531466 ZNF28P17035 718 aa7.86□□□□□ -1.15
PTPRK-220ENST00000531466 GDF5P43026 501 aa7.86□□□□□ -1.15
PTPRK-220ENST00000531466 HMGA2P52926 109 aa7.86□□□□□ -1.15
PTPRK-220ENST00000531466 RPL11P62913 178 aaKnown RBP7.86□□□□□ -1.15
PTPRK-220ENST00000531466 CRACR2BQ8N4Y2 399 aaPredicted RBP7.86□□□□□ -1.15
PTPRK-220ENST00000531466 GPRASP2Q96D09 838 aa7.86□□□□□ -1.15
PTPRK-220ENST00000531466 SHDQ96IW2 340 aa7.86□□□□□ -1.15
PTPRK-220ENST00000531466 SPATA32Q96LK8 384 aa7.86□□□□□ -1.15
PTPRK-220ENST00000531466 APBA2Q99767 749 aa7.86□□□□□ -1.15
PTPRK-220ENST00000531466 C9orf118A6NHY6 69 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 NOP56O00567 594 aaKnown RBP7.85□□□□□ -1.15
PTPRK-220ENST00000531466 SLPIP03973 132 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 NKX3-2P78367 333 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 MROH9Q5TGP6 573 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 CEP68Q76N32 757 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 PLEKHH3Q7Z736 793 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 ZFPM1Q8IX07 1006 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 NPLOC4Q8TAT6 608 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 KLC2Q9H0B6 622 aa7.85□□□□□ -1.15
PTPRK-220ENST00000531466 TIMM13Q9Y5L4 95 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-220ENST00000531466 NPEPPSL1A6NEC2 478 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 BCL6P41182 706 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 CYP4F3Q08477 520 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 SURF1Q15526 300 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 NLRP10Q86W26 655 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 RIOX2Q8IUF8 465 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 TRIM59Q8IWR1 403 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 CPLX3Q8WVH0 158 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 TRMT2BQ96GJ1 504 aaKnown RBP7.84□□□□□ -1.15
PTPRK-220ENST00000531466 NKX2-4Q9H2Z4 354 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 L2HGDHQ9H9P8 463 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 NGRNQ9NPE2 291 aaKnown RBP7.84□□□□□ -1.15
PTPRK-220ENST00000531466 CYP26B1Q9NR63 512 aa7.84□□□□□ -1.15
PTPRK-220ENST00000531466 GPR42O15529 346 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 NASPP49321 788 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-220ENST00000531466 CRIP3Q6Q6R5 217 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 PALM2Q8IXS6 379 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 FAM169BQ8N8A8 192 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 RASGRP4Q8TDF6 673 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 MBD6Q96DN6 1003 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 YTHDC1Q96MU7 727 aaKnown RBP7.83□□□□□ -1.16
PTPRK-220ENST00000531466 MRIQ9BWK5 157 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 TMEM168Q9H0V1 697 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 CD248Q9HCU0 757 aa7.83□□□□□ -1.16
PTPRK-220ENST00000531466 TMEFF2Q9UIK5 374 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-220ENST00000531466 IL13P35225 146 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 MLLT6P55198 1093 aaPredicted RBP7.82□□□□□ -1.16
PTPRK-220ENST00000531466 CASP7P55210 303 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 ZNF585AQ6P3V2 769 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 CCDC103Q8IW40 242 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 IGDCC4Q8TDY8 1250 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 MRGPRX3Q96LB0 322 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 JADE2Q9NQC1 790 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 FBXL7Q9UJT9 491 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 X6R8D5 127 aa7.82□□□□□ -1.16
PTPRK-220ENST00000531466 OVOL3O00110 214 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 ARNTLO00327 626 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 NAT2P11245 290 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 IQCEQ6IPM2 695 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 CIR1Q86X95 450 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms