RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 BCAS3Q9H6U6 928 aa18.7■□□□□ 0.58
RELA-216ENST00000531238 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
RELA-216ENST00000531238 GRIN2DO15399 1336 aa18.7■□□□□ 0.58
RELA-216ENST00000531238 FRMPD4Q14CM0 1322 aa18.7■□□□□ 0.58
RELA-216ENST00000531238 CCDC196A0A1B0GTZ2 297 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 PRPF3O43395 683 aaKnown RBP18.69■□□□□ 0.58
RELA-216ENST00000531238 CDK7P50613 346 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 SP2Q02086 613 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 TLE2Q04725 743 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 TTLL4Q14679 1199 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 PFKFB3Q16875 520 aaPredicted RBP18.69■□□□□ 0.58
RELA-216ENST00000531238 SH3RF1Q7Z6J0 888 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 OR6J1Q8NGC5 347 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 SMARCC2Q8TAQ2 1214 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 PRO3102Q9H379 93 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 STARD7Q9NQZ5 370 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 BARHL2Q9NY43 387 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 RTEL1Q9NZ71 1219 aa18.69■□□□□ 0.58
RELA-216ENST00000531238 COLQQ9Y215 455 aaPredicted RBP18.69■□□□□ 0.58
RELA-216ENST00000531238 DTNBO60941 627 aa18.68■□□□□ 0.58
RELA-216ENST00000531238 IFNAR1P17181 557 aa18.68■□□□□ 0.58
RELA-216ENST00000531238 ARHGAP1Q07960 439 aa18.68■□□□□ 0.58
RELA-216ENST00000531238 STK3Q13188 491 aa18.68■□□□□ 0.58
RELA-216ENST00000531238 TPCN1Q9ULQ1 816 aa18.68■□□□□ 0.58
RELA-216ENST00000531238 ELP1O95163 1332 aa18.68■□□□□ 0.58
RELA-216ENST00000531238 TRIM43BA6NCK2 446 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 SMCO2A6NFE2 343 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 A6NJR5 290 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 NKRFO15226 690 aaKnown RBP eCLIP18.67■□□□□ 0.589e-6■□□□□ 8.3
RELA-216ENST00000531238 CCND2P30279 289 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 AK2P54819 239 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 NAPAP54920 295 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 SEMA3FQ13275 785 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 CHRDL2Q6WN34 429 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 SLC43A3Q8NBI5 491 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 CUL5Q93034 780 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 TRIM43Q96BQ3 446 aaPredicted RBP18.67■□□□□ 0.58
RELA-216ENST00000531238 GLT1D1Q96MS3 346 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 RIC8AQ9NPQ8 531 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 PCDHA6Q9UN73 950 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 PCDHA8Q9Y5H6 950 aa18.67■□□□□ 0.58
RELA-216ENST00000531238 SCG2P13521 617 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 PSMC6P62333 389 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 AFG1LQ8WV93 481 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 VTI1AQ96AJ9 217 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 KIF2CQ99661 725 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 GDF15Q99988 308 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 SLC26A6Q9BXS9 759 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 TMEM260Q9NX78 707 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 LAMA3Q16787 3333 aa18.66■□□□□ 0.58
RELA-216ENST00000531238 ARVCFO00192 962 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 SORBS3O60504 671 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 PQBP1O60828 265 aaKnown RBP18.65■□□□□ 0.58
RELA-216ENST00000531238 ITGB8P26012 769 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 CLK2P49760 499 aaKnown RBP18.65■□□□□ 0.58
RELA-216ENST00000531238 PURAQ00577 322 aaKnown RBP18.65■□□□□ 0.58
RELA-216ENST00000531238 FAAP100Q0VG06 881 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 SCRN1Q12765 414 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 PCNX4Q63HM2 1172 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 ANKRD33Q7Z3H0 272 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 PPP1R13LQ8WUF5 828 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 PGBD1Q96JS3 809 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 INPP4AQ96PE3 977 aaPredicted RBP18.65■□□□□ 0.58
RELA-216ENST00000531238 PDLIM7Q9NR12 457 aa18.65■□□□□ 0.58
RELA-216ENST00000531238 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
RELA-216ENST00000531238 SPATA31C2B4DYI2 1134 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 ZEB2O60315 1214 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 GH1P01241 217 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 MYL3P08590 195 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 ICAM3P32942 547 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 MAGEA10P43363 369 aaPredicted RBP18.64■□□□□ 0.57
RELA-216ENST00000531238 CPT1AP50416 773 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 ITGA7Q13683 1181 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 MYSM1Q5VVJ2 828 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 PPP1R18Q6NYC8 613 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 RNF26Q9BY78 433 aaPredicted RBP18.64■□□□□ 0.57
RELA-216ENST00000531238 TELO2Q9Y4R8 837 aa18.64■□□□□ 0.57
RELA-216ENST00000531238 LAMA2P24043 3122 aaKnown RBP18.63■□□□□ 0.57
RELA-216ENST00000531238 KIAA1217Q5T5P2 1943 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 A0A0U1RQG5 324 aaPredicted RBP18.63■□□□□ 0.57
RELA-216ENST00000531238 hCG_1984214I3L0E3 225 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 PFKFB2O60825 505 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 EIF5BO60841 1220 aaKnown RBP18.63■□□□□ 0.57
RELA-216ENST00000531238 LARGE1O95461 756 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 CTDNEP1O95476 244 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 ITGB5P18084 799 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 NEK4P51957 841 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 CELF3Q5SZQ8 465 aaKnown RBP18.63■□□□□ 0.57
RELA-216ENST00000531238 ZNF713Q8N859 430 aaPredicted RBP18.63■□□□□ 0.57
RELA-216ENST00000531238 EMID1Q96A84 441 aaPredicted RBP18.63■□□□□ 0.57
RELA-216ENST00000531238 TOX2Q96NM4 488 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 ZMYND12Q9H0C1 365 aa18.63■□□□□ 0.57
RELA-216ENST00000531238 SZT2Q5T011 3432 aa18.62■□□□□ 0.57
RELA-216ENST00000531238 CABYRO75952 493 aa18.62■□□□□ 0.57
RELA-216ENST00000531238 MMP3P08254 477 aa18.62■□□□□ 0.57
RELA-216ENST00000531238 TGFB3P10600 412 aa18.62■□□□□ 0.57
RELA-216ENST00000531238 UBA1P22314 1058 aaKnown RBP18.62■□□□□ 0.57
RELA-216ENST00000531238 ADCY7P51828 1080 aa18.62■□□□□ 0.57
RELA-216ENST00000531238 MDM2Q00987 491 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms