RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 FGD1P98174 961 aa21.9■■□□□ 1.1
UBXN1-211ENST00000531056 LY6KQ17RY6 165 aa21.9■■□□□ 1.1
UBXN1-211ENST00000531056 VSIG10LQ86VR7 867 aa21.9■■□□□ 1.1
UBXN1-211ENST00000531056 BRF1Q92994 677 aa21.9■■□□□ 1.1
UBXN1-211ENST00000531056 VTI1AQ96AJ9 217 aa21.9■■□□□ 1.1
UBXN1-211ENST00000531056 SCN10AQ9Y5Y9 1956 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 A6NJR5 290 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 DCDC2CA8MYV0 355 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 KIAA0355O15063 1070 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 MYCLP12524 364 aaPredicted RBP21.89■■□□□ 1.09
UBXN1-211ENST00000531056 CCND2P30279 289 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 PURAQ00577 322 aaKnown RBP21.89■■□□□ 1.09
UBXN1-211ENST00000531056 ARHGAP1Q07960 439 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 USP17L6PQ6QN14 398 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 ZSWIM6Q9HCJ5 1215 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 POLR3EQ9NVU0 708 aa21.89■■□□□ 1.09
UBXN1-211ENST00000531056 ITGB8P26012 769 aa21.88■■□□□ 1.09
UBXN1-211ENST00000531056 METAP2P50579 478 aaKnown RBP eCLIP21.88■■□□□ 1.09
UBXN1-211ENST00000531056 ITGA7Q13683 1181 aa21.88■■□□□ 1.09
UBXN1-211ENST00000531056 WWC2Q6AWC2 1192 aa21.88■■□□□ 1.09
UBXN1-211ENST00000531056 RUFY3Q7L099 469 aa21.88■■□□□ 1.09
UBXN1-211ENST00000531056 FAM126BQ8IXS8 530 aa21.88■■□□□ 1.09
UBXN1-211ENST00000531056 SMARCC2Q8TAQ2 1214 aa21.88■■□□□ 1.09
UBXN1-211ENST00000531056 GPKOWQ92917 476 aaPredicted RBP eCLIP21.88■■□□□ 1.09
UBXN1-211ENST00000531056 CUL5Q93034 780 aa21.88■■□□□ 1.09
UBXN1-211ENST00000531056 LBHD1Q9BQE6 289 aaPredicted RBP21.88■■□□□ 1.09
UBXN1-211ENST00000531056 UBE2OQ9C0C9 1292 aaKnown RBP21.88■■□□□ 1.09
UBXN1-211ENST00000531056 DDX41Q9UJV9 622 aaKnown RBP21.88■■□□□ 1.09
UBXN1-211ENST00000531056 GH1P01241 217 aa21.87■■□□□ 1.09
UBXN1-211ENST00000531056 PSMC6P62333 389 aa21.87■■□□□ 1.09
UBXN1-211ENST00000531056 HEATR3Q7Z4Q2 680 aa21.87■■□□□ 1.09
UBXN1-211ENST00000531056 TM6SF1Q9BZW5 370 aa21.87■■□□□ 1.09
UBXN1-211ENST00000531056 TBX21Q9UL17 535 aa21.87■■□□□ 1.09
UBXN1-211ENST00000531056 NAP1L2Q9ULW6 460 aaPredicted RBP21.87■■□□□ 1.09
UBXN1-211ENST00000531056 MRVI1Q9Y6F6 885 aa21.87■■□□□ 1.09
UBXN1-211ENST00000531056 MYH7BA7E2Y1 1941 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 CD4P01730 458 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 MYL3P08590 195 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 EVCP57679 992 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 MRPS9P82933 396 aaKnown RBP21.86■■□□□ 1.09
UBXN1-211ENST00000531056 BRDTQ58F21 947 aaPredicted RBP21.86■■□□□ 1.09
UBXN1-211ENST00000531056 TDHQ8IZJ6 230 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 BADQ92934 168 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 EMID1Q96A84 441 aaPredicted RBP21.86■■□□□ 1.09
UBXN1-211ENST00000531056 SEZ6LQ9BYH1 1024 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 PSTPIP2Q9H939 334 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 TMEM39AQ9NV64 488 aa21.86■■□□□ 1.09
UBXN1-211ENST00000531056 SLC34A2O95436 690 aa21.85■■□□□ 1.09
UBXN1-211ENST00000531056 MMP3P08254 477 aa21.85■■□□□ 1.09
UBXN1-211ENST00000531056 ADD1P35611 737 aaKnown RBP21.85■■□□□ 1.09
UBXN1-211ENST00000531056 TOB2Q14106 344 aaPredicted RBP21.85■■□□□ 1.09
UBXN1-211ENST00000531056 TYW1BQ6NUM6 668 aa21.85■■□□□ 1.09
UBXN1-211ENST00000531056 PPP1R18Q6NYC8 613 aa21.85■■□□□ 1.09
UBXN1-211ENST00000531056 AFG1LQ8WV93 481 aa21.85■■□□□ 1.09
UBXN1-211ENST00000531056 ZFP91Q96JP5 570 aaPredicted RBP21.85■■□□□ 1.09
UBXN1-211ENST00000531056 MTG1Q9BT17 334 aaPredicted RBP21.85■■□□□ 1.09
UBXN1-211ENST00000531056 V9GY48 417 aaPredicted RBP21.85■■□□□ 1.09
UBXN1-211ENST00000531056 CCDC196A0A1B0GTZ2 297 aa21.84■■□□□ 1.09
UBXN1-211ENST00000531056 hCG_1984214I3L0E3 225 aa21.84■■□□□ 1.09
UBXN1-211ENST00000531056 KPNA6O60684 536 aa21.84■■□□□ 1.09
UBXN1-211ENST00000531056 STAM2O75886 525 aa21.84■■□□□ 1.09
UBXN1-211ENST00000531056 UBE2SQ16763 222 aa21.84■■□□□ 1.09
UBXN1-211ENST00000531056 KCNV1Q6PIU1 500 aa21.84■■□□□ 1.09
UBXN1-211ENST00000531056 ZNF713Q8N859 430 aaPredicted RBP21.84■■□□□ 1.09
UBXN1-211ENST00000531056 INPP4AQ96PE3 977 aaPredicted RBP21.84■■□□□ 1.09
UBXN1-211ENST00000531056 CYP46A1Q9Y6A2 500 aa21.84■■□□□ 1.09
UBXN1-211ENST00000531056 STXBP3O00186 592 aa21.83■■□□□ 1.09
UBXN1-211ENST00000531056 TLR3O15455 904 aaKnown RBP21.83■■□□□ 1.09
UBXN1-211ENST00000531056 RAG1P15918 1043 aa21.83■■□□□ 1.09
UBXN1-211ENST00000531056 UBA1P22314 1058 aaKnown RBP21.83■■□□□ 1.09
UBXN1-211ENST00000531056 PCNX4Q63HM2 1172 aa21.83■■□□□ 1.09
UBXN1-211ENST00000531056 DOCK5Q9H7D0 1870 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 SOX1O00570 391 aaPredicted RBP21.82■■□□□ 1.08
UBXN1-211ENST00000531056 B4GALT4O60513 344 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 TGFB3P10600 412 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 PDIA3P30101 505 aaKnown RBP21.82■■□□□ 1.08
UBXN1-211ENST00000531056 ICAM3P32942 547 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 NAPAP54920 295 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 SP2Q02086 613 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 SEMA3FQ13275 785 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 LAMC2Q13753 1193 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 XRRA1Q6P2D8 792 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 PPTC7Q8NI37 304 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 UPF3BQ9BZI7 483 aaKnown RBP21.82■■□□□ 1.08
UBXN1-211ENST00000531056 ALDH8A1Q9H2A2 487 aaPredicted RBP21.82■■□□□ 1.08
UBXN1-211ENST00000531056 RIC8AQ9NPQ8 531 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 BARHL2Q9NY43 387 aa21.82■■□□□ 1.08
UBXN1-211ENST00000531056 TIMP1P01033 207 aa21.81■■□□□ 1.08
UBXN1-211ENST00000531056 HOXD8P13378 290 aaPredicted RBP21.81■■□□□ 1.08
UBXN1-211ENST00000531056 NTRK3Q16288 839 aa21.81■■□□□ 1.08
UBXN1-211ENST00000531056 PFKFB3Q16875 520 aaPredicted RBP21.81■■□□□ 1.08
UBXN1-211ENST00000531056 NBPF20Q3BBV1 942 aa21.81■■□□□ 1.08
UBXN1-211ENST00000531056 GNPTABQ3T906 1256 aa21.81■■□□□ 1.08
UBXN1-211ENST00000531056 CELF3Q5SZQ8 465 aaKnown RBP21.81■■□□□ 1.08
UBXN1-211ENST00000531056 MYSM1Q5VVJ2 828 aa21.81■■□□□ 1.08
UBXN1-211ENST00000531056 TEX2Q8IWB9 1127 aa21.81■■□□□ 1.08
UBXN1-211ENST00000531056 DHX37Q8IY37 1157 aaKnown RBP21.81■■□□□ 1.08
UBXN1-211ENST00000531056 GGPS1O95749 300 aa21.8■■□□□ 1.08
UBXN1-211ENST00000531056 DGKDQ16760 1214 aa21.8■■□□□ 1.08
UBXN1-211ENST00000531056 LRIT3Q3SXY7 679 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms