RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 PGBD1Q96JS3 809 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 COLQQ9Y215 455 aaPredicted RBP21.55■■□□□ 1.04
GMDS-208ENST00000530927 FRMPD4Q14CM0 1322 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 PIK3CDO00329 1044 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 EIF3JO75822 258 aaKnown RBP21.55■■□□□ 1.04
GMDS-208ENST00000530927 NAPAP54920 295 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 TTLL4Q14679 1199 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 PKN1Q16512 942 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 SH3RF1Q7Z6J0 888 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 PCSK9Q8NBP7 692 aaKnown RBP21.55■■□□□ 1.04
GMDS-208ENST00000530927 VTI1AQ96AJ9 217 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 Q9Y3F1 56 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 PQBP1O60828 265 aaKnown RBP21.54■■□□□ 1.04
GMDS-208ENST00000530927 CCND2P30279 289 aa21.54■■□□□ 1.04
GMDS-208ENST00000530927 ANAPC15P60006 121 aa21.54■■□□□ 1.04
GMDS-208ENST00000530927 PSMC6P62333 389 aa21.54■■□□□ 1.04
GMDS-208ENST00000530927 TLE2Q04725 743 aa21.54■■□□□ 1.04
GMDS-208ENST00000530927 CUL5Q93034 780 aa21.54■■□□□ 1.04
GMDS-208ENST00000530927 BCAS3Q9H6U6 928 aa21.54■■□□□ 1.04
GMDS-208ENST00000530927 RTEL1Q9NZ71 1219 aa21.54■■□□□ 1.04
GMDS-208ENST00000530927 TPCN1Q9ULQ1 816 aa21.54■■□□□ 1.04
GMDS-208ENST00000530927 CCDC196A0A1B0GTZ2 297 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 AK2P54819 239 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 SP2Q02086 613 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 ARHGAP1Q07960 439 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 PFKFB3Q16875 520 aaPredicted RBP21.53■■□□□ 1.04
GMDS-208ENST00000530927 GLT1D1Q96MS3 346 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 SLC26A6Q9BXS9 759 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 TMEM260Q9NX78 707 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 BARHL2Q9NY43 387 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 DDX41Q9UJV9 622 aaKnown RBP21.53■■□□□ 1.04
GMDS-208ENST00000530927 MRVI1Q9Y6F6 885 aa21.53■■□□□ 1.04
GMDS-208ENST00000530927 GRIN2DO15399 1336 aa21.52■■□□□ 1.04
GMDS-208ENST00000530927 MYL3P08590 195 aa21.52■■□□□ 1.04
GMDS-208ENST00000530927 SCG2P13521 617 aa21.52■■□□□ 1.04
GMDS-208ENST00000530927 AFG1LQ8WV93 481 aa21.52■■□□□ 1.04
GMDS-208ENST00000530927 PRDM5Q9NQX1 630 aaPredicted RBP21.52■■□□□ 1.04
GMDS-208ENST00000530927 PRPF3O43395 683 aaKnown RBP21.51■■□□□ 1.03
GMDS-208ENST00000530927 LARGE1O95461 756 aa21.51■■□□□ 1.03
GMDS-208ENST00000530927 MDM2Q00987 491 aaPredicted RBP21.51■■□□□ 1.03
GMDS-208ENST00000530927 SEMA3FQ13275 785 aa21.51■■□□□ 1.03
GMDS-208ENST00000530927 IL17RAQ96F46 866 aa21.51■■□□□ 1.03
GMDS-208ENST00000530927 ZNF274Q96GC6 653 aaPredicted RBP21.51■■□□□ 1.03
GMDS-208ENST00000530927 PDLIM7Q9NR12 457 aa21.51■■□□□ 1.03
GMDS-208ENST00000530927 RBM27Q9P2N5 1060 aaKnown RBP21.51■■□□□ 1.03
GMDS-208ENST00000530927 DOCK5Q9H7D0 1870 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 TRIM43BA6NCK2 446 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 SMCO2A6NFE2 343 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 NKRFO15226 690 aaKnown RBP eCLIP21.5■■□□□ 1.03
GMDS-208ENST00000530927 IFNAR1P17181 557 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 MAGEA10P43363 369 aaPredicted RBP21.5■■□□□ 1.03
GMDS-208ENST00000530927 ADCY7P51828 1080 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 SCRN1Q12765 414 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 C1orf53Q5VUE5 145 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 TRIM43Q96BQ3 446 aaPredicted RBP21.5■■□□□ 1.03
GMDS-208ENST00000530927 RIC8AQ9NPQ8 531 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 PCDHA6Q9UN73 950 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 TELO2Q9Y4R8 837 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 PCDHA8Q9Y5H6 950 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 ELP1O95163 1332 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 LTBP2Q14767 1821 aa21.5■■□□□ 1.03
GMDS-208ENST00000530927 GH1P01241 217 aa21.49■■□□□ 1.03
GMDS-208ENST00000530927 UBA1P22314 1058 aaKnown RBP21.49■■□□□ 1.03
GMDS-208ENST00000530927 ITGB8P26012 769 aa21.49■■□□□ 1.03
GMDS-208ENST00000530927 CPT1AP50416 773 aa21.49■■□□□ 1.03
GMDS-208ENST00000530927 CDK7P50613 346 aa21.49■■□□□ 1.03
GMDS-208ENST00000530927 PURAQ00577 322 aaKnown RBP21.49■■□□□ 1.03
GMDS-208ENST00000530927 PPP1R18Q6NYC8 613 aa21.49■■□□□ 1.03
GMDS-208ENST00000530927 PRO3102Q9H379 93 aa21.49■■□□□ 1.03
GMDS-208ENST00000530927 A0A0U1RQG5 324 aaPredicted RBP21.48■■□□□ 1.03
GMDS-208ENST00000530927 A6NJR5 290 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 ARVCFO00192 962 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 MMP3P08254 477 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 NEK4P51957 841 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 FAAP100Q0VG06 881 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 ITGA7Q13683 1181 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 PCNX4Q63HM2 1172 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 AIFM3Q96NN9 605 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 INPP4AQ96PE3 977 aaPredicted RBP21.48■■□□□ 1.03
GMDS-208ENST00000530927 VPS54Q9P1Q0 977 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 MYH7BA7E2Y1 1941 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 LAMA3Q16787 3333 aa21.48■■□□□ 1.03
GMDS-208ENST00000530927 SPDYE3A6NKU9 549 aa21.47■■□□□ 1.03
GMDS-208ENST00000530927 ZEB2O60315 1214 aa21.47■■□□□ 1.03
GMDS-208ENST00000530927 GGPS1O95749 300 aa21.47■■□□□ 1.03
GMDS-208ENST00000530927 NECAB1Q8N987 351 aa21.47■■□□□ 1.03
GMDS-208ENST00000530927 KIF2CQ99661 725 aa21.47■■□□□ 1.03
GMDS-208ENST00000530927 GDF15Q99988 308 aa21.47■■□□□ 1.03
GMDS-208ENST00000530927 RNF26Q9BY78 433 aaPredicted RBP21.47■■□□□ 1.03
GMDS-208ENST00000530927 ALDH8A1Q9H2A2 487 aaPredicted RBP21.47■■□□□ 1.03
GMDS-208ENST00000530927 hCG_1984214I3L0E3 225 aa21.46■■□□□ 1.03
GMDS-208ENST00000530927 CLTBP09497 229 aa21.46■■□□□ 1.03
GMDS-208ENST00000530927 ITGB5P18084 799 aa21.46■■□□□ 1.03
GMDS-208ENST00000530927 CLK2P49760 499 aaKnown RBP21.46■■□□□ 1.03
GMDS-208ENST00000530927 CHMP4BP1P59074 171 aa21.46■■□□□ 1.03
GMDS-208ENST00000530927 JAKMIP3Q5VZ66 844 aa21.46■■□□□ 1.03
GMDS-208ENST00000530927 ANKRD33Q7Z3H0 272 aa21.46■■□□□ 1.03
GMDS-208ENST00000530927 DHX37Q8IY37 1157 aaKnown RBP21.46■■□□□ 1.03
GMDS-208ENST00000530927 ZNF713Q8N859 430 aaPredicted RBP21.46■■□□□ 1.03
GMDS-208ENST00000530927 RASGRP4Q8TDF6 673 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms