RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 KIF11P52732 1056 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 GEN1Q17RS7 908 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 PRR16Q569H4 304 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 TADA2BQ86TJ2 420 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 PAGE5Q96GU1 130 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 PBKQ96KB5 322 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 HEG1Q9ULI3 1381 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 MOCS3O95396 460 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 RPSAP08865 295 aaKnown RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 CD19P15391 556 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 RESP18Q5W5W9 173 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 ARL6IP4Q66PJ3 421 aaKnown RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 NSMCE1Q8WV22 266 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 RNF34Q969K3 372 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 JPH2Q9BR39 696 aaPredicted RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 AMNQ9BXJ7 453 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 HMGB1P1B2RPK0 211 aaPredicted RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 HSPA6P17066 643 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 ATP8A1Q9Y2Q0 1164 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 MED14O60244 1454 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 WDR17Q8IZU2 1322 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 EIF4A3P38919 411 aaKnown RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 KRT31Q15323 416 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 E2F4Q16254 413 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 EAPPQ56P03 285 aaPredicted RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 FMR1NBQ8N0W7 255 aaPredicted RBP16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 RSAD2Q8WXG1 361 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 ABCC3O15438 1527 aa16.82■□□□□ 0.28
PCDHA4-203ENST00000530339 CRCPO75575 148 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 ICA1Q05084 483 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 DHX9Q08211 1270 aaKnown RBP16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 PSMD6Q15008 389 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 ICE2Q659A1 982 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 TOGARAM2Q6ZUX3 1019 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 KLHL29Q96CT2 875 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 SPATS2LQ9NUQ6 558 aaKnown RBP16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 WDR70Q9NW82 654 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 BCS1LQ9Y276 419 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 PCDHB6Q9Y5E3 794 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 ARHGAP42A6NI28 874 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 SH3GLB2Q9NR46 395 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 LAMC1P11047 1609 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 CYP27A1Q02318 531 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 TCP11X2Q5H9J9 407 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 SPZ1Q9BXG8 430 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 CDC42BPGQ6DT37 1551 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 GOLGA8HP0CJ92 632 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 SLFN13Q68D06 897 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 PDZD4Q76G19 769 aaPredicted RBP16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 PCDHA13Q9Y5I0 950 aa16.81■□□□□ 0.28
PCDHA4-203ENST00000530339 USP27XA6NNY8 438 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 K7ENM7 598 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 GIPC1O14908 333 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 CASC4Q6P4E1 433 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 NLGN1Q8N2Q7 840 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 CFAP61Q8NHU2 1237 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 AIFM3Q96NN9 605 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 UNC13BO14795 1591 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 FAM170AA1A519 330 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 TNNC2P02585 160 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 LIG4P49917 911 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 SIK1P57059 783 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 SESN3P58005 492 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 SH2D4BQ5SQS7 431 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 ECM2O94769 699 aaPredicted RBP16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 NR2F2P24468 414 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 SEMA3FQ13275 785 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 CPXCR1Q8N123 301 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 FTCDO95954 541 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 ATF7P17544 494 aaPredicted RBP16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 PLTPP55058 493 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 EIF3BP55884 814 aaKnown RBP16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 DMP1Q13316 513 aaPredicted RBP16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 ARHGEF16Q5VV41 709 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 WDR11Q9BZH6 1224 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 PUS7LQ9H0K6 701 aaKnown RBP16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 GOLPH3LQ9H4A5 285 aa16.8■□□□□ 0.28
PCDHA4-203ENST00000530339 FRMD3A2A2Y4 597 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 TCP10Q12799 353 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 CDC37Q16543 378 aaPredicted RBP16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 STK36Q9NRP7 1315 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 CNGA1P29973 690 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 MFAP3P55082 362 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 PPP2R5AQ15172 486 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 RASIP1Q5U651 963 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 EXOC8Q8IYI6 725 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 MB21D1Q8N884 522 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 EPSTI1Q96J88 318 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 ERBB3P21860 1342 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 BAG2O95816 211 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 TTLL1O95922 423 aa16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 RNASELQ05823 741 aaKnown RBP16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 GLE1Q53GS7 698 aaKnown RBP16.79■□□□□ 0.28
PCDHA4-203ENST00000530339 PPP4R1Q8TF05 950 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms