RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 USP54Q70EL1 1684 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 TONSLQ96HA7 1378 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 NHSQ6T4R5 1651 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 TMEM265A0A087WTH1 108 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 ADAMTS4O75173 837 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 PRAMEF1O95521 474 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 CD247P20963 164 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 NMIQ13287 307 aaPredicted RBP6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 CLEC16AQ2KHT3 1053 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 HEATR6Q6AI08 1181 aaKnown RBP6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 INTS5Q6P9B9 1019 aaKnown RBP6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 ADAT2Q7Z6V5 191 aaKnown RBP6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 GP6Q9HCN6 339 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 SEMA3GQ9NS98 782 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 ATP10DQ9P241 1426 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 A0A1W2PP64 1363 aa6.98□□□□□ -1.29
AMBRA1-209ENST00000529963 U2SURPO15042 1029 aaKnown RBP6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 SPRED2Q7Z698 418 aa6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 PIWIL2Q8TC59 973 aaKnown RBP6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 IP6K1Q92551 441 aa6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 PPP1R14AQ96A00 147 aa6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 HRASLS5Q96KN8 279 aa6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 LNPKQ9C0E8 428 aa6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 BSDC1Q9NW68 430 aaPredicted RBP6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 APEX2Q9UBZ4 518 aa6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 SUSD2Q9UGT4 822 aa6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 PITPNM2Q9BZ72 1349 aa6.97□□□□□ -1.29
AMBRA1-209ENST00000529963 TPP2P29144 1249 aaPredicted RBP6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 CLCN7P51798 805 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 ZNF445P59923 1031 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 NCAPHQ15003 741 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 NOL9Q5SY16 702 aaKnown RBP6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 DTX1Q86Y01 620 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 BCL7CQ8WUZ0 217 aaPredicted RBP6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 SMARCC1Q92922 1105 aaPredicted RBP6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 COG3Q96JB2 828 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 GPR62Q9BZJ7 368 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 KLHL25Q9H0H3 589 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 ASCC2Q9H1I8 757 aaPredicted RBP6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 PCMTD2Q9NV79 361 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 GPATCH2Q9NW75 528 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 CCDC39Q9UFE4 941 aa6.96□□□□□ -1.29
AMBRA1-209ENST00000529963 LTN1O94822 1766 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 SCO2A0A1W2PP80 73 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 SRFP11831 508 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 SPINK2P20155 84 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 POLD1P28340 1107 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 AMPHP49418 695 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 PRKCQQ04759 706 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 SERINC3Q13530 473 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 PPP2R5DQ14738 602 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 LTV1Q96GA3 475 aaPredicted RBP6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 HDAC8Q9BY41 377 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 NOL6Q9H6R4 1146 aaKnown RBP6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 CHST7Q9NS84 486 aa6.96□□□□□ -1.3
AMBRA1-209ENST00000529963 FAM221BA6H8Z2 402 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 SIGLEC6O43699 453 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 CD8BP10966 210 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 IKZF1Q13422 519 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 BMS1Q14692 1282 aaKnown RBP6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 TCEAL1Q15170 157 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 ZNF827Q17R98 1081 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 CCDC144BQ3MJ40 725 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 ANKRD39Q53RE8 183 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 NFXL1Q6ZNB6 911 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 DPH6Q7L8W6 267 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 WFDC3Q8IUB2 231 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 CREG2Q8IUH2 290 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 SYTL4Q96C24 671 aaPredicted RBP6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 DSCC1Q9BVC3 393 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 VAV3Q9UKW4 847 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 SUGT1Q9Y2Z0 365 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 SNX11Q9Y5W9 270 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 PAPPAQ13219 1627 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 KAT6BQ8WYB5 2073 aa6.95□□□□□ -1.3
AMBRA1-209ENST00000529963 BTAF1O14981 1849 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 FAM208AQ9UK61 1670 aaKnown RBP6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 MAP3K19Q56UN5 1328 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 ST20-MTHFSA0A0A6YYL1 179 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 ANKRD34BA5PLL1 514 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 KIAA1324LA8MWY0 1029 aaPredicted RBP6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 HYAL3O43820 417 aaPredicted RBP6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 SUSD5O60279 629 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 HOXC9P31274 260 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 CTSKP43235 329 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 SV2CQ496J9 727 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 CRTC3Q6UUV7 619 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 TSPYL5Q86VY4 417 aaPredicted RBP6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 FIBCD1Q8N539 461 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 ZDHHC15Q96MV8 337 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 TESK2Q96S53 571 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 OSBPL2Q9H1P3 480 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 TRIT1Q9H3H1 467 aaKnown RBP6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 ZSWIM4Q9H7M6 989 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 PRDM7Q9NQW5 492 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 SIRPGQ9P1W8 387 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 DUSP13Q9UII6 198 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 SLC5A6Q9Y289 635 aa6.94□□□□□ -1.3
AMBRA1-209ENST00000529963 ITGA4P13612 1032 aa6.93□□□□□ -1.3
AMBRA1-209ENST00000529963 NBPF6Q5VWK0 638 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms