RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 C22orf23Q9BZE7 217 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 RIC8AQ9NPQ8 531 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 KIAA1217Q5T5P2 1943 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 ALPK3Q96L96 1907 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 SMCO2A6NFE2 343 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 CPLX1O14810 134 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 EVI5O60447 810 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 PFKFB2O60825 505 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 RGS20O76081 388 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 ARIH2O95376 493 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 TXNP10599 105 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 CCND2P30279 289 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 RBM25P49756 843 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 BEX3Q00994 111 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 UBE2SQ16763 222 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 LRRC26Q2I0M4 334 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 SLC39A5Q6ZMH5 540 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 KIF2CQ99661 725 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 GLT8D2Q9H1C3 349 aa14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 SLKQ9H2G2 1235 aaPredicted RBP14.56□□□□□ -0.08
CCDC90B-216ENST00000529856 A0A1W2PQ45 241 aaPredicted RBP14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 A0A1W2PQY0 241 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 PPFIA3O75145 1194 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 ASGR1P07306 291 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 ADCY7P51828 1080 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 ATN1P54259 1190 aaPredicted RBP14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 MRPS9P82933 396 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 SSRP1Q08945 709 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 SCRN1Q12765 414 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 FSCN1Q16658 493 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 LY6KQ17RY6 165 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 XRRA1Q6P2D8 792 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 CPLX2Q6PUV4 134 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 TRIM22Q8IYM9 498 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 COPS5Q92905 334 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 DDX41Q9UJV9 622 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 PCDHA6Q9UN73 950 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 PCDHA8Q9Y5H6 950 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 NR2E3Q9Y5X4 410 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 DNAH12Q6ZR08 3092 aa14.55□□□□□ -0.08
CCDC90B-216ENST00000529856 ESYT2A0FGR8 921 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 SPDYE3A6NKU9 549 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 ZEB2O60315 1214 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 STAM2O75886 525 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 SNX17Q15036 470 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 PRPF38BQ5VTL8 546 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 C1orf53Q5VUE5 145 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 PCNX4Q63HM2 1172 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 KCNV1Q6PIU1 500 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 OR6J1Q8NGC5 347 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 CCDC12Q8WUD4 166 aaPredicted RBP14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 ZFP91Q96JP5 570 aaPredicted RBP14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 ZMYND12Q9H0C1 365 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 MRVI1Q9Y6F6 885 aa14.54□□□□□ -0.08
CCDC90B-216ENST00000529856 ELP1O95163 1332 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 A6NJR5 290 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 H0YGN5 161 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 FOSP01100 380 aaPredicted RBP14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 TGFB3P10600 412 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 CLK2P49760 499 aaKnown RBP14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 RTP1P59025 263 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 ME3Q16798 604 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 C7orf61Q8IZ16 206 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 GLT1D1Q96MS3 346 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 INPP4AQ96PE3 977 aaPredicted RBP14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 UPF2Q9HAU5 1272 aaKnown RBP14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 C6orf50Q9HD87 102 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 STARD7Q9NQZ5 370 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 RTEL1Q9NZ71 1219 aa14.53□□□□□ -0.08
CCDC90B-216ENST00000529856 CABYRO75952 493 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 CDKL5O76039 1030 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 DEXIO95424 95 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 LARGE1O95461 756 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 GH1P01241 217 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 ICAM3P32942 547 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 CPT1AP50416 773 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 ARHGAP1Q07960 439 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 GNPTABQ3T906 1256 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 BRDTQ58F21 947 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 CXCL17Q6UXB2 119 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 NECAB1Q8N987 351 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 EHMT1Q9H9B1 1298 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 SH3GLB2Q9NR46 395 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 TMEM260Q9NX78 707 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 VPS54Q9P1Q0 977 aa14.52□□□□□ -0.09
CCDC90B-216ENST00000529856 SPATA31C2B4DYI2 1134 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 ADAMTS3O15072 1205 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 CTDNEP1O95476 244 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 GNA11P29992 359 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 SP2Q02086 613 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 SEMA3FQ13275 785 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 AP3B2Q13367 1082 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 LAMC2Q13753 1193 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 TRIM60Q495X7 471 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 NLRX1Q86UT6 975 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 CCDC148Q8NFR7 591 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 AFG1LQ8WV93 481 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 GTF3C6Q969F1 213 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 EMID1Q96A84 441 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms