RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 TMEM39BQ9GZU3 492 aa17.4■□□□□ 0.38
APLF-206ENST00000529851 RCOR1Q9UKL0 485 aa17.4■□□□□ 0.38
APLF-206ENST00000529851 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
APLF-206ENST00000529851 EPS15P42566 896 aa17.4■□□□□ 0.38
APLF-206ENST00000529851 PKN1Q16512 942 aa17.4■□□□□ 0.38
APLF-206ENST00000529851 TBC1D10BQ4KMP7 808 aaPredicted RBP17.4■□□□□ 0.38
APLF-206ENST00000529851 SH3D19Q5HYK7 790 aa17.4■□□□□ 0.38
APLF-206ENST00000529851 BCAS4Q8TDM0 211 aa17.4■□□□□ 0.38
APLF-206ENST00000529851 TAF1DQ9H5J8 278 aaPredicted RBP17.4■□□□□ 0.38
APLF-206ENST00000529851 MRPL44Q9H9J2 332 aaKnown RBP17.4■□□□□ 0.38
APLF-206ENST00000529851 DDNO94850 711 aaPredicted RBP17.39■□□□□ 0.37
APLF-206ENST00000529851 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 NDUFA8P51970 172 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 INHBEP58166 350 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 TRIM29Q14134 588 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 MTF1Q14872 753 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 ANGEL2Q5VTE6 544 aaKnown RBP17.39■□□□□ 0.37
APLF-206ENST00000529851 JMYQ8N9B5 988 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 PRPF38AQ8NAV1 312 aaKnown RBP17.39■□□□□ 0.37
APLF-206ENST00000529851 MSANTD4Q8NCY6 345 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 PHF20Q9BVI0 1012 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 DCAF8L1A6NGE4 600 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 SCG2P13521 617 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 CACNB3P54284 484 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 SRBD1Q8N5C6 995 aaKnown RBP17.39■□□□□ 0.37
APLF-206ENST00000529851 ZNF526Q8TF50 670 aaPredicted RBP17.39■□□□□ 0.37
APLF-206ENST00000529851 ALG1Q9BT22 464 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 FANCLQ9NW38 375 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 MCM8Q9UJA3 840 aa17.39■□□□□ 0.37
APLF-206ENST00000529851 PRPF6O94906 941 aaKnown RBP17.38■□□□□ 0.37
APLF-206ENST00000529851 MMP1P03956 469 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 EEF2P13639 858 aaKnown RBP17.38■□□□□ 0.37
APLF-206ENST00000529851 SLC4A8Q2Y0W8 1093 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 KLRG1Q96E93 195 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 ZNF396Q96N95 335 aaPredicted RBP17.38■□□□□ 0.37
APLF-206ENST00000529851 HSD3B7Q9H2F3 369 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 VCPKMTQ9H867 229 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 PTPRFP10586 1907 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 TRPM7Q96QT4 1865 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 USP17L5A8MUK1 530 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 NMT2O60551 498 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 GHRHRQ02643 423 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 FMR1NBQ8N0W7 255 aaPredicted RBP17.38■□□□□ 0.37
APLF-206ENST00000529851 RBM46Q8TBY0 533 aaKnown RBP17.38■□□□□ 0.37
APLF-206ENST00000529851 GGA3Q9NZ52 723 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 ODF2LQ9ULJ1 636 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 SF3A1Q15459 793 aaKnown RBP17.38■□□□□ 0.37
APLF-206ENST00000529851 FCHSD1Q86WN1 690 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.37
APLF-206ENST00000529851 STX8Q9UNK0 236 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 SH3BP1Q9Y3L3 701 aa17.38■□□□□ 0.37
APLF-206ENST00000529851 WDR46O15213 610 aaKnown RBP17.37■□□□□ 0.37
APLF-206ENST00000529851 SKAP2O75563 359 aaPredicted RBP17.37■□□□□ 0.37
APLF-206ENST00000529851 BMP15O95972 392 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 ACTN3Q08043 901 aaPredicted RBP17.37■□□□□ 0.37
APLF-206ENST00000529851 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 CENPHQ9H3R5 247 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 BARHL2Q9NY43 387 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 FEM1BQ9UK73 627 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 hCG_1642624A0A1W2PR95 340 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 SHTN1A0MZ66 631 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 POTEB2H3BUK9 544 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 EGFRP00533 1210 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 IRAK1P51617 712 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 STK38Q15208 465 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 SAFBQ15424 915 aaKnown RBP eCLIP17.37■□□□□ 0.37
APLF-206ENST00000529851 SPECC1Q5M775 1068 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 VSTM4Q8IW00 320 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 MSL3Q8N5Y2 521 aaKnown RBP17.37■□□□□ 0.37
APLF-206ENST00000529851 NOA1Q8NC60 698 aaKnown RBP17.37■□□□□ 0.37
APLF-206ENST00000529851 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
APLF-206ENST00000529851 MAP3K20Q9NYL2 800 aaKnown RBP17.37■□□□□ 0.37
APLF-206ENST00000529851 CDC23Q9UJX2 597 aa17.37■□□□□ 0.37
APLF-206ENST00000529851 GOLGA6L9A6NEM1 432 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 KLRF2D3W0D1 207 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 GH2P01242 217 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 CEP112Q8N8E3 955 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 MRPS27Q92552 414 aaKnown RBP17.36■□□□□ 0.37
APLF-206ENST00000529851 PNMA6FA0A0J9YX94 578 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 POTECB2RU33 542 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 ZNF202O95125 648 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 CALRP27797 417 aaKnown RBP17.36■□□□□ 0.37
APLF-206ENST00000529851 KIF23Q02241 960 aaPredicted RBP17.36■□□□□ 0.37
APLF-206ENST00000529851 RRP1BQ14684 758 aaKnown RBP17.36■□□□□ 0.37
APLF-206ENST00000529851 SEPT2Q15019 361 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 C11orf91Q3C1V1 193 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 CHURC1Q8WUH1 139 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 SLC26A6Q9BXS9 759 aa17.36■□□□□ 0.37
APLF-206ENST00000529851 GCFC2P16383 781 aaKnown RBP17.35■□□□□ 0.37
APLF-206ENST00000529851 SLFN13Q68D06 897 aa17.35■□□□□ 0.37
APLF-206ENST00000529851 LINC00301Q8NCQ3 95 aa17.35■□□□□ 0.37
APLF-206ENST00000529851 POLR3EQ9NVU0 708 aa17.35■□□□□ 0.37
APLF-206ENST00000529851 YEATS4O95619 227 aa17.35■□□□□ 0.37
APLF-206ENST00000529851 KRT40Q6A162 431 aa17.35■□□□□ 0.37
APLF-206ENST00000529851 USP17L2Q6R6M4 530 aa17.35■□□□□ 0.37
APLF-206ENST00000529851 LDHDQ86WU2 507 aa17.35■□□□□ 0.37
APLF-206ENST00000529851 BPIFA3Q9BQP9 254 aa17.35■□□□□ 0.37
APLF-206ENST00000529851 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms