RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 IGSF22Q8N9C0 903 aa5.5□□□□□ -1.53
SVIP-203ENST00000529848 NUP43Q8NFH3 380 aa5.5□□□□□ -1.53
SVIP-203ENST00000529848 PCDH19Q8TAB3 1148 aa5.5□□□□□ -1.53
SVIP-203ENST00000529848 CELF4Q9BZC1 486 aaKnown RBP5.5□□□□□ -1.53
SVIP-203ENST00000529848 CABP5Q9NP86 173 aa5.5□□□□□ -1.53
SVIP-203ENST00000529848 CATSPERZQ9NTU4 200 aa5.5□□□□□ -1.53
SVIP-203ENST00000529848 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.5□□□□□ -1.53
SVIP-203ENST00000529848 IMPACTQ9P2X3 320 aa5.5□□□□□ -1.53
SVIP-203ENST00000529848 ADGRE2Q9UHX3 823 aa5.5□□□□□ -1.53
SVIP-203ENST00000529848 CCDC66A2RUB6 948 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 C22orf46C9J442 243 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 M0R2C6 588 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 GLRX3O76003 335 aaKnown RBP5.49□□□□□ -1.53
SVIP-203ENST00000529848 PYGMP11217 842 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 GNAT1P11488 350 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 RAC2P15153 192 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 KCNA6P17658 529 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 FPR2P25090 351 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 SART3Q15020 963 aaKnown RBP5.49□□□□□ -1.53
SVIP-203ENST00000529848 ABHD17CQ6PCB6 329 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 C16orf59Q7L2K0 433 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 CABP7Q86V35 215 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 NLRP10Q86W26 655 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 ANKLE2Q86XL3 938 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 NLGN2Q8NFZ4 835 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 OR2W6PQ8NHA6 318 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 DPF3Q92784 378 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 USP7Q93009 1102 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 KCNJ15Q99712 375 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 EPB41L1Q9H4G0 881 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.49□□□□□ -1.53
SVIP-203ENST00000529848 ATP8A1Q9Y2Q0 1164 aa5.49□□□□□ -1.53
SVIP-203ENST00000529848 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 FAM83GA6ND36 823 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 WNT9AO14904 365 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 CKMP06732 381 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 PRKCAP17252 672 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 TACR1P25103 407 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 GDNFP39905 211 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 SCNN1BP51168 640 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 SPIRE1Q08AE8 756 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 STRN3Q13033 797 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 CRY1Q16526 586 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 LILRA2Q8N149 483 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 AFAP1L2Q8N4X5 818 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 CISD2Q8N5K1 135 aaKnown RBP5.48□□□□□ -1.53
SVIP-203ENST00000529848 ASIC4Q96FT7 647 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 JAM3Q9BX67 310 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 FAM126AQ9BYI3 521 aaPredicted RBP5.48□□□□□ -1.53
SVIP-203ENST00000529848 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 MTFR1LQ9H019 292 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 PDLIM7Q9NR12 457 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 GPR160Q9UJ42 338 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 ACSL6Q9UKU0 697 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 ZKSCAN5Q9Y2L8 839 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 X6R8D5 127 aa5.48□□□□□ -1.53
SVIP-203ENST00000529848 CBX4O00257 560 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 GAS7O60861 476 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 DGKIO75912 1065 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 HPXP02790 462 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 RNASE1P07998 156 aaKnown RBP5.47□□□□□ -1.53
SVIP-203ENST00000529848 ARL4AP40617 200 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 CYP4F8P98187 520 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 MVKQ03426 396 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 DHCR24Q15392 516 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 NR0B2Q15466 257 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 SEPT7Q16181 437 aaKnown RBP5.47□□□□□ -1.53
SVIP-203ENST00000529848 TMEM177Q53S58 311 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 ZMYM1Q5SVZ6 1142 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 MROH9Q5TGP6 573 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 NFXL1Q6ZNB6 911 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 DDX42Q86XP3 938 aaKnown RBP eCLIP5.47□□□□□ -1.53
SVIP-203ENST00000529848 KIF18BQ86Y91 864 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 Q8N1Y9 231 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 C2orf69Q8N8R5 385 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 CHST14Q8NCH0 376 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 TTC1Q99614 292 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 PLCD4Q9BRC7 762 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 ORAI3Q9BRQ5 295 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 MTA3Q9BTC8 594 aa5.47□□□□□ -1.53
SVIP-203ENST00000529848 PSPNO60542 156 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 PPP1R11O60927 126 aaPredicted RBP5.46□□□□□ -1.54
SVIP-203ENST00000529848 CDK11BP21127 795 aaKnown RBP5.46□□□□□ -1.54
SVIP-203ENST00000529848 ERVFC1P60507 584 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 LRP8Q14114 963 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 CHRNA2Q15822 529 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 ZNF792Q3KQV3 632 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 BICRALQ6AI39 1079 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 EP400NLQ6ZTU2 488 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 OVCH1Q7RTY7 1134 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 STRA8Q7Z7C7 330 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 RIOX2Q8IUF8 465 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
SVIP-203ENST00000529848 PLEKHO2Q8TD55 490 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 MYLIPQ8WY64 445 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 CDIP1Q9H305 208 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 C19orf44Q9H6X5 657 aa5.46□□□□□ -1.54
SVIP-203ENST00000529848 RC3H2Q9HBD1 1191 aaKnown RBP5.46□□□□□ -1.54
SVIP-203ENST00000529848 HOMER2Q9NSB8 354 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms