RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PATL2C9JE40 543 aaKnown RBP13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 NFIBO00712 420 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 MBTPS2O43462 519 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 SLC3A2P08195 630 aaKnown RBP13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 MMP3P08254 477 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 TDO2P48775 406 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 CHMP4BP1P59074 171 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 TRIM71Q2Q1W2 868 aaKnown RBP13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 CCDC62Q6P9F0 684 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 BTNL9Q6UXG8 535 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 RNF207Q6ZRF8 634 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 RPAINQ86UA6 219 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 TOP1MTQ969P6 601 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 KATNAL1Q9BW62 490 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 LMAN2LQ9H0V9 348 aa13.76□□□□□ -0.21
AMBRA1-207ENST00000529553 STXBP3O00186 592 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 HMMRO75330 724 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 GH1P01241 217 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 RB1P06400 928 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 RLBP1P12271 317 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 CALML3P27482 149 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 NUBP1P53384 320 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 SMAD4Q13485 552 aaKnown RBP13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 DGKDQ16760 1214 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 ZNF618Q5T7W0 954 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 MYOCDQ8IZQ8 938 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 FBXL6Q8N531 539 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 RGS22Q8NE09 1264 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 DCAF4Q8WV16 495 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 AFG1LQ8WV93 481 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 CLEC4DQ8WXI8 215 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 APPBP2Q92624 585 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 OSBP2Q969R2 916 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 EPB41L4AQ9HCS5 686 aaPredicted RBP13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 HDAC6Q9UBN7 1215 aa13.75□□□□□ -0.21
AMBRA1-207ENST00000529553 TRIOO75962 3097 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 C5orf67F2Z3F1 127 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 APPP05067 770 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 NOVP48745 357 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 ZXDAP98168 799 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 MBTPS1Q14703 1052 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 PLEKHG4Q58EX7 1191 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 ERMP1Q7Z2K6 904 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 IFNL3Q8IZI9 196 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 DBF4BQ8NFT6 615 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 YME1L1Q96TA2 773 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 STX8Q9UNK0 236 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 PTPRSQ13332 1948 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 CFAP54Q96N23 3096 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 SIP14410 1827 aa13.74□□□□□ -0.21
AMBRA1-207ENST00000529553 ZFHX2Q9C0A1 2572 aaPredicted RBP13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 PROB1E7EW31 1015 aa13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 ARIH2O95376 493 aa13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 PSEN2P49810 448 aa13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 ARHGAP1Q07960 439 aa13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 HYAL1Q12794 435 aa13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 SLC30A10Q6XR72 485 aa13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 EMID1Q96A84 441 aaPredicted RBP13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-207ENST00000529553 RSPH10B2B2RC85 870 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 HAS3O00219 553 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 GPAA1O43292 621 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 EYA4O95677 639 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 RSPH10BP0C881 870 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 ADAM15Q13444 863 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 SYDE2Q5VT97 1194 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 KBTBD3Q8NAB2 608 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 ATOH1Q92858 354 aaPredicted RBP13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 C11orf84Q9BUA3 381 aaPredicted RBP13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 IL17RBQ9NRM6 502 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 CD207Q9UJ71 328 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 RWDD3Q9Y3V2 267 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 TECTAO75443 2155 aa13.72□□□□□ -0.21
AMBRA1-207ENST00000529553 MYH4Q9Y623 1939 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 LOC730098B7Z3J9 87 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 BMPR1AP36894 532 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 DLX2Q07687 328 aaPredicted RBP13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 LAMC2Q13753 1193 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 MFSD10Q14728 455 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 LY6KQ17RY6 165 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 SEPT8Q92599 483 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 CHMP4CQ96CF2 233 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 IL17RAQ96F46 866 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 IWS1Q96ST2 819 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 COL4A6Q14031 1691 aa13.71□□□□□ -0.21
AMBRA1-207ENST00000529553 CACNA1AO00555 2505 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 WDR19Q8NEZ3 1342 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 ZDBF2Q9HCK1 2354 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 CAND2O75155 1236 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 PPFIA4O75335 1185 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 F2P00734 622 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 AVPR2P30518 371 aa13.7□□□□□ -0.22
AMBRA1-207ENST00000529553 SLC16A2P36021 539 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms